RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 IKBKEQ14164 716 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 DEFB115Q30KQ5 88 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 SIRPB2Q5JXA9 342 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 KIAA0930Q6ICG6 404 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ASRGL1Q7L266 308 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 LPCAT2Q7L5N7 544 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ARPINQ7Z6K5 226 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 CLVS1Q8IUQ0 354 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 SYTL1Q8IYJ3 562 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ACVR1CQ8NER5 493 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ZMIZ2Q8NF64 920 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 SELENOMQ8WWX9 145 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 GPR22Q99680 433 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 WDR83Q9BRX9 315 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 PRPF19Q9UMS4 504 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 GNEQ9Y223 722 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 U3KQV3 271 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 A8MT66 165 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 LZTS3O60299 673 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 KRT6AP02538 564 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 KRT6BP04259 564 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 CKMT2P17540 419 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 KRT6CP48668 564 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 YBEYP58557 167 aaPredicted RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 PRKG2Q13237 762 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 DPYSQ14117 519 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 PPP1R3AQ16821 1122 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 PARP15Q460N3 678 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 ANO7Q6IWH7 933 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 AAGABQ6PD74 315 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 CEP97Q8IW35 865 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 TAGAPQ8N103 731 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 CLDN19Q8N6F1 224 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 SIDT2Q8NBJ9 832 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 OSBPL2Q9H1P3 480 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 RHBDL2Q9NX52 303 aa11.01□□□□□ -0.65
COL27A1-204ENST00000477421 EIF2B4Q9UI10 523 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 COPG1Q9Y678 874 aaKnown RBP11.01□□□□□ -0.65
COL27A1-204ENST00000477421 A0A0U1RQS6 177 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 CA12O43570 354 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 TMCC1O94876 653 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 OR4F21O95013 312 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 GSNP06396 782 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 CKBP12277 381 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 UQCRBP14927 111 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 NCK1P16333 377 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 CREB5Q02930 508 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF621Q6ZSS3 439 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 GPR141Q7Z602 305 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF598Q86UK7 904 aaKnown RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 TXNDC5Q8NBS9 432 aaKnown RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 FBXO22Q8NEZ5 403 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 RIN3Q8TB24 985 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 ITFG1Q8TB96 612 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 ARNTL2Q8WYA1 636 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
COL27A1-204ENST00000477421 CDK5RAP1Q96SZ6 601 aaKnown RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 FAM126AQ9BYI3 521 aaPredicted RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 DHRS12A0PJE2 317 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 AOC2O75106 756 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 ULK1O75385 1050 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 SELPP16109 830 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 GM2AP17900 193 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 UGT1A6P19224 532 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 UGT1A1P22309 533 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 UGT1A4P22310 534 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 SERPINA4P29622 427 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 CD68P34810 354 aaPredicted RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 UGT1A3P35503 534 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 UGT1A5P35504 534 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 HSPA7P48741 367 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 CLCQ05315 142 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 NOGQ13253 232 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF284Q2VY69 593 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 MS4A13Q5J8X5 152 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 KIAA0408Q6ZU52 694 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 HORMAD1Q86X24 394 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 CAMK1DQ8IU85 385 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 FAM47BQ8NA70 645 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 MAPK15Q8TD08 544 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 LRTOMTQ8WZ04 291 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 TSSK3Q96PN8 268 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 KCNA7Q96RP8 456 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 CACYBPQ9HB71 228 aaKnown RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 STK39Q9UEW8 545 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 A0A1W2PQ67 120 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 PRMT5O14744 637 aaPredicted RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 CLDN11O75508 207 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 IGSF6O95976 241 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 HNRNPCP07910 306 aaKnown RBP eCLIP11□□□□□ -0.65
COL27A1-204ENST00000477421 OCA2Q04671 838 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 SKIV2LQ15477 1246 aaKnown RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 TRIP4Q15650 581 aaPredicted RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 TMEM135Q86UB9 458 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 ST13P5Q8NFI4 369 aaPredicted RBP11□□□□□ -0.65
COL27A1-204ENST00000477421 SLC2A13Q96QE2 648 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 SPOCK3Q9BQ16 436 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 GPR62Q9BZJ7 368 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms