RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	SPTLC3	Q9NUV7	552 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TMEM30A	Q9NV96	361 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HAUS2	Q9NVX0	235 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DEC1	Q9P2X7	70 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	WNT16	Q9UBV4	365 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CYTH4	Q9UIA0	394 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CDH22	Q9UJ99	828 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ANAPC7	Q9UJX3	599 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DUSP12	Q9UNI6	340 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PCDHA13	Q9Y5I0	950 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HS3ST4	Q9Y661	456 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	WNT6	Q9Y6F9	365 aa		4.62	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TBC1D3B	A6NDS4	549 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GOLGA6L9	A6NEM1	432 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TMEM110-MUSTN1	A8MSY1	372 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KCNU1	A8MYU2	1149 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NEDD8-MDP1	E9PL57	170 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MDM4	O15151	490 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MSI1	O43347	362 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HOXA3	O43365	443 aa	Predicted RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CREB3	O43889	395 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TSPAN3	O60637	253 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SRGAP2	O75044	1071 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ATG13	O75143	517 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FSBP	O95073	299 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PRAMEF12	O95522	483 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ATP5B	P06576	529 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HK1	P19367	917 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DRD1	P21728	446 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HTR7	P34969	479 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FLT3	P36888	993 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	EIF2D	P41214	584 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MAGEA9	P43362	315 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CXCR3	P49682	368 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	VAV2	P52735	878 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SIGLEC14	Q08ET2	396 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF177	Q13360	481 aa	Predicted RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MAMLD1	Q13495	774 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KRT81	Q14533	505 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MESD	Q14696	234 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	UBXN2B	Q14CS0	331 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DHCR24	Q15392	516 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MLF2	Q15773	248 aa	Predicted RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF77	Q15935	545 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FBXO43	Q4G163	708 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC44A4	Q53GD3	710 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MPP7	Q5T2T1	576 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ERMARD	Q5T6L9	678 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CCDC181	Q5TID7	509 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SYPL2	Q5VXT5	272 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RWDD4	Q6NW29	188 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	VIT	Q6UXI7	678 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	BZW1	Q7L1Q6	419 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TRMT11	Q7Z4G4	463 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DAAM2	Q86T65	1068 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	FAM131B	Q86XD5	332 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PSTK	Q8IV42	348 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MFN1	Q8IWA4	741 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LRRC8A	Q8IWT6	810 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RHOT1	Q8IXI2	618 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LGI2	Q8N0V4	545 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CPXM2	Q8N436	756 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	EMC1	Q8N766	993 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	UBL4B	Q8N7F7	174 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KCTD6	Q8NC69	237 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC35G2	Q8TBE7	412 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	WFIKKN2	Q8TEU8	576 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NSMCE1	Q8WV22	266 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RSAD2	Q8WXG1	361 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RFFL	Q8WZ73	363 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CD101	Q93033	1021 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TBC1D31	Q96DN5	1066 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PGAP3	Q96FM1	320 aa	Predicted RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF830	Q96NB3	372 aa	Predicted RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HAPLN3	Q96S86	360 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PNKP	Q96T60	521 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TBCB	Q99426	244 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NPY6R	Q99463	290 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	P2RY13	Q9BPV8	354 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	C1QTNF1	Q9BXJ1	281 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC2A11	Q9BYW1	496 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CPEB1	Q9BZB8	566 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	EBF3	Q9H4W6	596 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RETREG1	Q9H6L5	497 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ECT2	Q9H8V3	914 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ARHGEF3	Q9NR81	526 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DNAJC17	Q9NVM6	304 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	OSER1	Q9NX31	292 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DDX56	Q9NY93	547 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TAS2R14	Q9NYV8	317 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MUTYH	Q9UIF7	546 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	AGO1	Q9UL18	857 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CA14	Q9ULX7	337 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HPCAL4	Q9UM19	191 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PLA2G4C	Q9UP65	541 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PIAS3	Q9Y6X2	628 aa		4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	RANBP2	P49792	3224 aa	Known RBP	4.61	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MYO16	Q9Y6X6	1858 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms