RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 GALCP54803 685 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TIRAPP58753 221 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 RPL15P61313 204 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 YBX1P67809 324 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 NKX3-2P78367 333 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CD83Q01151 205 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 MVKQ03426 396 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TAP1Q03518 808 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TLE3Q04726 772 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CCDC15Q0P6D6 951 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PDZK1IP1Q13113 114 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TRIM28Q13263 835 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 ALKBH1Q13686 389 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 RAPSNQ13702 412 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 DDX39BQ13838 428 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 SQLEQ14534 574 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 LPIN1Q14693 890 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PTPRCAPQ14761 206 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 WDR43Q15061 677 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 ACOX1Q15067 660 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PCOLCEQ15113 449 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 NAB2Q15742 525 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 HADHQ16836 314 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CCDC142Q17RM4 750 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 ASTE1Q2TB18 679 aaPredicted RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PCGF3Q3KNV8 242 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 LEXMQ3ZCV2 418 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 KCTD21Q4G0X4 260 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 KLHL26Q53HC5 615 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 FBXO48Q5FWF7 155 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 HERC4Q5GLZ8 1057 aaPredicted RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TMEM196Q5HYL7 178 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CYP4A22Q5TCH4 519 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 FAM91A1Q658Y4 838 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 KRT39Q6A163 491 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CCDC144NLQ6NUI1 221 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PAPD4Q6PIY7 484 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TEPPQ6URK8 271 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 SERPINA13PQ6UXR4 307 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 INTS8Q75QN2 995 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 ARMCX2Q7L311 632 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 GPRIN1Q7Z2K8 1008 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PPP1R32Q7Z5V6 425 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 FRMD5Q7Z6J6 570 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TADA2BQ86TJ2 420 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 VASH2Q86V25 355 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 SPATA24Q86W54 205 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PROSER1Q86XN7 944 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 SPPL2CQ8IUH8 684 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 MMP21Q8N119 569 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 VPS52Q8N1B4 723 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 SFRP1Q8N474 314 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 DCLK2Q8N568 766 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PLD5Q8N7P1 536 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 EIF1ADQ8N9N8 165 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 PIK3C3Q8NEB9 887 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 REPS2Q8NFH8 660 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 NCOA7Q8NI08 942 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 SLC16A10Q8TF71 515 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 ARHGAP45Q92619 1136 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 NKD2Q969F2 451 aaPredicted RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 MRPL38Q96DV4 380 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 MMABQ96EY8 250 aaPredicted RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TMEM176AQ96HP8 235 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 HHIPL1Q96JK4 782 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 ADAD1Q96M93 576 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 HSPA12BQ96MM6 686 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 ZBTB18Q99592 522 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 LZTS2Q9BRK4 669 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 SRSF8Q9BRL6 282 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 SLC39A3Q9BRY0 314 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 NDC1Q9BTX1 674 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 MRI1Q9BV20 369 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TLR10Q9BXR5 811 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 ZNF341Q9BYN7 854 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 IFIH1Q9BYX4 1025 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 GPR88Q9GZN0 384 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CTDSP1Q9GZU7 261 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CLPBQ9H078 707 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 RAB17Q9H0T7 212 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 WNT5BQ9H1J7 359 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CARD9Q9H257 536 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 EPB41L4BQ9H329 900 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 XKR8Q9H6D3 395 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 YY1AP1Q9H869 796 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 GORASP2Q9H8Y8 452 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 KCNK9Q9NPC2 374 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 DLL4Q9NR61 685 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 FARSBQ9NSD9 589 aaKnown RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 OLAHQ9NV23 265 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 BABAM1Q9NWV8 329 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 TMEM161AQ9NX61 479 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 IMPACTQ9P2X3 320 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 NCDNQ9UBB6 729 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 CRNNQ9UBG3 495 aaPredicted RBP2.91□□□□□ -1.94
HMGN4-202ENST00000477243 HDAC6Q9UBN7 1215 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 FBLN5Q9UBX5 448 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 Q9UFV3 132 aa2.91□□□□□ -1.94
HMGN4-202ENST00000477243 KCNN3Q9UGI6 736 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms