RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 C3orf38Q5JPI3 329 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 CRTC1Q6UUV9 634 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 RD3Q7Z3Z2 195 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 TMEM139Q8IV31 216 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 LPCAT1Q8NF37 534 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 KIAA1524Q8TCG1 905 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 TFB1MQ8WVM0 346 aaKnown RBP16.17■□□□□ 0.18
COL1A1-205ENST00000476387 KRT35Q92764 455 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 P3H4Q92791 437 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 FUBP1Q96AE4 644 aaKnown RBP16.17■□□□□ 0.18
COL1A1-205ENST00000476387 DTD2Q96FN9 168 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 SLC46A1Q96NT5 459 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 FCRL3Q96P31 734 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-205ENST00000476387 AGAP3Q96P47 875 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 CEP41Q9BYV8 373 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 GOLGA6AQ9NYA3 693 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 GULP1Q9UBP9 304 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 RPL26L1Q9UNX3 145 aaKnown RBP16.17■□□□□ 0.18
COL1A1-205ENST00000476387 SATB2Q9UPW6 733 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 PPIL1Q9Y3C6 166 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 DUSP10Q9Y6W6 482 aa16.17■□□□□ 0.18
COL1A1-205ENST00000476387 A0A1W2PNU3 283 aaPredicted RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 CAPN8A6NHC0 703 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 EIF4E1BA6NMX2 242 aaKnown RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 TK2O00142 265 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 PDE2AO00408 941 aaPredicted RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 PJA2O43164 708 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 PECAM1P16284 738 aaPredicted RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 RBMS1P29558 406 aaKnown RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 CTNNA1P35221 906 aaKnown RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 ETV3P41162 512 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 KIF5AQ12840 1032 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 PPP2R5EQ16537 467 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 CCDC181Q5TID7 509 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 LRRC66Q68CR7 880 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 PNCKQ6P2M8 343 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 GPR155Q7Z3F1 870 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 HSD11B1LQ7Z5J1 315 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 TSPAN33Q86UF1 283 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 LSM14AQ8ND56 463 aaKnown RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 WDR36Q8NI36 951 aaKnown RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 OR1E3Q8WZA6 343 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 HAUS1Q96CS2 278 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 ADGRE3Q9BY15 652 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 DPH1Q9BZG8 443 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 LACRTQ9GZZ8 138 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 FGF22Q9HCT0 170 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 SIRPGQ9P1W8 387 aa16.16■□□□□ 0.18
COL1A1-205ENST00000476387 SAE1Q9UBE0 346 aaPredicted RBP16.16■□□□□ 0.18
COL1A1-205ENST00000476387 KALRNO60229 2985 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 MGAQ8IWI9 3026 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 TEX51A0A1B0GUA7 166 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 CCDC66A2RUB6 948 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 TMEM202A6NGA9 273 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 TMX2-CTNND1H3BSU7 103 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 ATXN7O15265 892 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-205ENST00000476387 MTSS1O43312 755 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 CETN2P41208 172 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 PDX1P52945 283 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 GSDMDP57764 484 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 COPS2P61201 443 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 SKOR1P84550 965 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 PRKD1Q15139 912 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-205ENST00000476387 PTPRRQ15256 657 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 BROXQ5VW32 411 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 KCTD16Q68DU8 428 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 RAET1GQ6H3X3 334 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 B4GALNT4Q76KP1 1039 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 NT5DC3Q86UY8 548 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 CNTD1Q8N815 330 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 GPR156Q8NFN8 814 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 CCDC74AQ96AQ1 378 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 LIN37Q96GY3 246 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-205ENST00000476387 PRR11Q96HE9 360 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-205ENST00000476387 DESI2Q9BSY9 194 aa16.15■□□□□ 0.18
COL1A1-205ENST00000476387 PHPT1Q9NRX4 125 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-205ENST00000476387 ZFC3H1O60293 1989 aaKnown RBP16.15■□□□□ 0.18
COL1A1-205ENST00000476387 CCDC187A0A096LP49 1063 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 MACROD2A1Z1Q3 448 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 MMP2P08253 660 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 MYCLP1P12525 358 aaPredicted RBP16.14■□□□□ 0.17
COL1A1-205ENST00000476387 PTPN3P26045 913 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 CTNNA2P26232 953 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 RWDD2BP57060 319 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 IHHQ14623 411 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 TEX44Q53QW1 395 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 OGFOD3Q6PK18 319 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 NYAP1Q6ZVC0 841 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 Q6ZVL8 140 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 BBS12Q6ZW61 710 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 ZC3H18Q86VM9 953 aaKnown RBP16.14■□□□□ 0.17
COL1A1-205ENST00000476387 HEATR4Q86WZ0 1026 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 SYCE1Q8N0S2 351 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 CBARPQ8N350 705 aaPredicted RBP16.14■□□□□ 0.17
COL1A1-205ENST00000476387 ARL14Q8N4G2 192 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 KCNE4Q8WWG9 221 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 CCDC97Q96F63 343 aaPredicted RBP16.14■□□□□ 0.17
COL1A1-205ENST00000476387 IMP4Q96G21 291 aaKnown RBP16.14■□□□□ 0.17
COL1A1-205ENST00000476387 GFM1Q96RP9 751 aaKnown RBP16.14■□□□□ 0.17
COL1A1-205ENST00000476387 HEMGNQ9BXL5 484 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms