RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CDKL2Q92772 493 aa18.05■□□□□ 0.48
ATG4B-217ENST00000475693 SEC16BQ96JE7 1060 aa18.05■□□□□ 0.48
ATG4B-217ENST00000475693 MCCC1Q96RQ3 725 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-217ENST00000475693 LGALS13Q9UHV8 139 aa18.05■□□□□ 0.48
ATG4B-217ENST00000475693 MTO1Q9Y2Z2 717 aaKnown RBP18.05■□□□□ 0.48
ATG4B-217ENST00000475693 PPIL1Q9Y3C6 166 aa18.05■□□□□ 0.48
ATG4B-217ENST00000475693 GAPDHSO14556 408 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-217ENST00000475693 C1SP09871 688 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 HOXB2P14652 356 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 PAMP19021 973 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 DRD1P21728 446 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 XPAP23025 273 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-217ENST00000475693 MLF2Q15773 248 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-217ENST00000475693 TMEM31Q5JXX7 168 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 FBXL19Q6PCT2 694 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 TDRPQ86YL5 185 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 TMIEQ8NEW7 156 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 OR4L1Q8NH43 312 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 FOXQ1Q9C009 403 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 KDM4CQ9H3R0 1056 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 FAM50BQ9Y247 325 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 CRYL1Q9Y2S2 319 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 CD3EAPO15446 510 aaKnown RBP18.04■□□□□ 0.48
ATG4B-217ENST00000475693 ETV3P41162 512 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 POLR2LP62875 67 aaKnown RBP18.04■□□□□ 0.48
ATG4B-217ENST00000475693 XIAPP98170 497 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 RALGDSQ12967 914 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 CAMK2GQ13555 558 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-217ENST00000475693 MDM1Q8TC05 714 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 SCAMP4Q969E2 229 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 PBXIP1Q96AQ6 731 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 FAM136AQ96C01 138 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 NECAB3Q96P71 396 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-217ENST00000475693 OSBPL1AQ9BXW6 950 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 IL26Q9NPH9 171 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 FBXO5Q9UKT4 447 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 PKP3Q9Y446 797 aa18.04■□□□□ 0.48
ATG4B-217ENST00000475693 A0A1W2PP55 124 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 DRD3P35462 400 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 P2RY2P41231 377 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 ZRANB3Q5FWF4 1079 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-217ENST00000475693 Q6ZVL8 140 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 NLRP9Q7RTR0 991 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 CMC1Q7Z7K0 106 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 NDNQ99608 321 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 MFSD1Q9H3U5 465 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 SLC40A1Q9NP59 571 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 THEGQ9P2T0 379 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 WDFY4Q6ZS81 3184 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 TSPAN11A1L157 253 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 SLC7A4O43246 635 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 OR1I1O60431 355 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 ITGA2BP08514 1039 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 ADRB3P13945 408 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 MPP2Q14168 576 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 CST6Q15828 149 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 PUS10Q3MIT2 529 aaKnown RBP18.03■□□□□ 0.48
ATG4B-217ENST00000475693 PPM1JQ5JR12 505 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 TRABD2AQ86V40 505 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 CILP2Q8IUL8 1156 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 LRIG1Q96JA1 1093 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 LYSMD1Q96S90 227 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 GABRG3Q99928 467 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 RSPH9Q9H1X1 276 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-217ENST00000475693 MLXIPLQ9NP71 852 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 HACD3Q9P035 362 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 TXNDC16Q9P2K2 825 aa18.03■□□□□ 0.48
ATG4B-217ENST00000475693 DOCK9Q9BZ29 2069 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 CKAP5Q14008 2032 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 ITGB7P26010 798 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 TARSP26639 723 aaKnown RBP18.02■□□□□ 0.48
ATG4B-217ENST00000475693 GP5P40197 560 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 ZNF460Q14592 562 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 RBM20Q5T481 1227 aaKnown RBP18.02■□□□□ 0.48
ATG4B-217ENST00000475693 TMPRSS6Q8IU80 811 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 SIX5Q8N196 739 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 PELI3Q8N2H9 469 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 C2CD4AQ8NCU7 369 aaPredicted RBP18.02■□□□□ 0.48
ATG4B-217ENST00000475693 CHMP6Q96FZ7 201 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 RBBP8Q99708 897 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 CPNE1Q99829 537 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 ARHGEF3Q9NR81 526 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 CATSPERZQ9NTU4 200 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 DKK3Q9UBP4 350 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 FETUBQ9UGM5 382 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 SORCS3Q9UPU3 1222 aa18.02■□□□□ 0.48
ATG4B-217ENST00000475693 PRR23AA6NEV1 266 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 MMP20O60882 483 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 KRT4P19013 534 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 DRD4P21917 467 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 FOXN2P32314 431 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 RPS14P62263 151 aaKnown RBP18.02■□□□□ 0.47
ATG4B-217ENST00000475693 ARHGEF7Q14155 803 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 FRG1Q14331 258 aaKnown RBP18.02■□□□□ 0.47
ATG4B-217ENST00000475693 UBXN2BQ14CS0 331 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 CHRNA6Q15825 494 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 SDE2Q6IQ49 451 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 TAS2R42Q7RTR8 314 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 ZC3HC1Q86WB0 502 aaKnown RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms