RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 BBS5Q8N3I7 341 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 AFAP1L2Q8N4X5 818 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 LPGAT1Q92604 370 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 C19orf60Q96EN9 201 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 KLHL32Q96NJ5 620 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 TUBGCP5Q96RT8 1024 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 MUC3BQ9H195 1237 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 MID1IP1Q9NPA3 183 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 FKBPLQ9UIM3 349 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 SUFUQ9UMX1 484 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 RAI2Q9Y5P3 530 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 DNAJC15Q9Y5T4 150 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.05□□□□□ -0.16
UBXN11-214ENST00000475591 NCF1BA6NI72 391 aaPredicted RBP14.05□□□□□ -0.16
UBXN11-214ENST00000475591 NCF1CA8MVU1 366 aaPredicted RBP14.05□□□□□ -0.16
UBXN11-214ENST00000475591 E7ENX8 843 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 CLDN11O75508 207 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 SRP72O76094 671 aaKnown RBP14.05□□□□□ -0.16
UBXN11-214ENST00000475591 CRTAMO95727 393 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 CD160O95971 181 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 F11P03951 625 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 GFAPP14136 432 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 NCF1P14598 390 aaPredicted RBP14.05□□□□□ -0.16
UBXN11-214ENST00000475591 ME2P23368 584 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 NFKB2Q00653 900 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 ZNF177Q13360 481 aaPredicted RBP14.05□□□□□ -0.16
UBXN11-214ENST00000475591 PTK2BQ14289 1009 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 SQLEQ14534 574 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 GEN1Q17RS7 908 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 ACBD5Q5T8D3 534 aaPredicted RBP14.05□□□□□ -0.16
UBXN11-214ENST00000475591 RNF220Q5VTB9 566 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 KIAA1841Q6NSI8 718 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 PQLC1Q8N2U9 271 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 LRRC43Q8N309 656 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 TRPC4APQ8TEL6 797 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 PEX13Q92968 403 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 SLC39A3Q9BRY0 314 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 PCDHAC1Q9H158 963 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 CACNA2D2Q9NY47 1150 aa14.05□□□□□ -0.16
UBXN11-214ENST00000475591 GMPR2Q9P2T1 348 aaKnown RBP14.05□□□□□ -0.16
UBXN11-214ENST00000475591 CAPN8A6NHC0 703 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 SUPT3HB4E1H0 165 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 CDC7O00311 574 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 SUPT3HO75486 399 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 SNUPNO95149 360 aaKnown RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 LYNP07948 512 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 MZF1P28698 734 aaPredicted RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 TUFMP49411 452 aaKnown RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 PSME3P61289 254 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 ECT2LQ008S8 904 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 GALNT1Q10472 559 aaPredicted RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 TRAF2Q12933 501 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 BTG3Q14201 252 aaPredicted RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 TSNQ15631 228 aaKnown RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 MMEL1Q495T6 779 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 LILRA2Q8N149 483 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 SLC22A12Q96S37 553 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 GPR21Q99679 349 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 MRPL1Q9BYD6 325 aaKnown RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 YIPF3Q9GZM5 350 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 AKTIPQ9H8T0 292 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 COPS7BQ9H9Q2 264 aaPredicted RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 SCOCQ9UIL1 159 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 VPS28Q9UK41 221 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 PSMD13Q9UNM6 376 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 BTRCQ9Y297 605 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 ILVBLA1L0T0 632 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 MAGEA13PA6NCF6 341 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 PIP5K1BO14986 540 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 NIPSNAP2O75323 286 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 ALDH1A3P47895 512 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 LRP8Q14114 963 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 PTPRNQ16849 979 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 DEFB115Q30KQ5 88 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 AUTS2Q8WXX7 1259 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 CDK5RAP1Q96SZ6 601 aaKnown RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 CWH43Q9H720 699 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 TRPM5Q9NZQ8 1165 aa14.04□□□□□ -0.16
UBXN11-214ENST00000475591 TSR3Q9UJK0 312 aaKnown RBP14.04□□□□□ -0.16
UBXN11-214ENST00000475591 A0A1B0GVM2 712 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 NPEPPSL1A6NEC2 478 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 ACOT8O14734 319 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 CASQ2O14958 399 aaPredicted RBP14.03□□□□□ -0.16
UBXN11-214ENST00000475591 HOXA2O43364 376 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 CLASP2O75122 1294 aaKnown RBP14.03□□□□□ -0.16
UBXN11-214ENST00000475591 NDUFS3O75489 264 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 TMCC1O94876 653 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 PRAMEF12O95522 483 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 EFEMP2O95967 443 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 C1RP00736 705 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 EEF1DP29692 281 aaKnown RBP14.03□□□□□ -0.16
UBXN11-214ENST00000475591 AGTR2P50052 363 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 LAMB3Q13751 1172 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 GRB7Q14451 532 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
UBXN11-214ENST00000475591 TAF1AQ15573 450 aaPredicted RBP14.03□□□□□ -0.16
UBXN11-214ENST00000475591 ADGRF1Q5T601 910 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 FBXL19Q6PCT2 694 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 AFTPHQ6ULP2 937 aa14.03□□□□□ -0.16
UBXN11-214ENST00000475591 FUNDC1Q8IVP5 155 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms