RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 AARS2Q5JTZ9 985 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SIRPB2Q5JXA9 342 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CERCAMQ5T4B2 595 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 TSTD2Q5T7W7 516 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 LCE2AQ5TA79 106 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 PMS2CLQ68D20 193 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 TRIM68Q6AZZ1 485 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 KIAA0930Q6ICG6 404 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 LINGO4Q6UY18 593 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CERS6Q6ZMG9 384 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 UNC5AQ6ZN44 842 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 TIFABQ6ZNK6 161 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 USP45Q70EL2 814 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ZNF534Q76KX8 674 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CYP2U1Q7Z449 544 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 NLRP8Q86W28 1048 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ANKMY2Q8IV38 441 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CTAGE3PQ8IX95 158 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 GSPT2Q8IYD1 628 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 MPP5Q8N3R9 675 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 TAB3Q8N5C8 712 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 GPR150Q8NGU9 434 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 RPLP0P6Q8NHW5 317 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ACMSDQ8TDX5 336 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 LRRN4Q8WUT4 740 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SLC44A1Q8WWI5 657 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ZCCHC14Q8WYQ9 949 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 OR8D1Q8WZ84 308 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 BHMTQ93088 406 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SCRN2Q96FV2 425 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CERS2Q96G23 380 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 TRIB3Q96RU7 358 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SLC32A1Q9H598 525 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ZFYVE1Q9HBF4 777 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 SSU72Q9NP77 194 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 PPANQ9NQ55 473 aaKnown RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 DYRK4Q9NR20 520 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 C20orf96Q9NUD7 363 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 UBP1Q9NZI7 540 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 ZFATQ9P243 1243 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 THAP10Q9P2Z0 257 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 LHX3Q9UBR4 397 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 IL36AQ9UHA7 158 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 LGALS13Q9UHV8 139 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CORO1CQ9ULV4 474 aaPredicted RBP7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CLEC4EQ9ULY5 219 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 CHMP2BQ9UQN3 213 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 NEUROG3Q9Y4Z2 214 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 PCDHB9Q9Y5E1 797 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 DENND4CQ5VZ89 1909 aa7.03□□□□□ -1.28
SHQ1-207ENST00000475558 POC1B-GALNT4F8VUJ3 575 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 H7C0S8 307 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 TRAFD1O14545 582 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 SASH3O75995 380 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 SYF2O95926 243 aaKnown RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 TOP3BO95985 862 aaKnown RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 AVPP01185 164 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 MT-ND3P03897 115 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 PYGLP06737 847 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 ATXN1LP0C7T5 689 aaKnown RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 ARSAP15289 507 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 TPH1P17752 444 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 KRT15P19012 456 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 GLDCP23378 1020 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 GP5P40197 560 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 GRIA1P42261 906 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 CCNHP51946 323 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 GPX6P59796 221 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 PRAMEP78395 509 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 IRX4P78413 519 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 ACVR1Q04771 509 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 ELP6Q0PNE2 266 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 MSLNQ13421 630 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 STARD3Q14849 445 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 SEPT7Q16181 437 aaKnown RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 PCSK7Q16549 785 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 QPCTQ16769 361 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 GEN1Q17RS7 908 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 UAP1L1Q3KQV9 507 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 GPR33Q49SQ1 333 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 TNFAIP8L3Q5GJ75 292 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 TEDDM1Q5T9Z0 273 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 RNF187Q5TA31 235 aaPredicted RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 NEPROQ6NW34 567 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 ERAP2Q6P179 960 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 C22orf39Q6P5X5 142 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 SERPINA13PQ6UXR4 307 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 MARK2Q7KZI7 788 aaKnown RBP7.02□□□□□ -1.29
SHQ1-207ENST00000475558 CNTN4Q8IWV2 1026 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 STK40Q8N2I9 435 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 SLC25A41Q8N5S1 370 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 NETO2Q8NC67 525 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 TSTD1Q8NFU3 115 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 OR2A12Q8NGT7 310 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 FAM76AQ8TAV0 307 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 WFDC5Q8TCV5 224 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 FRS2Q8WU20 508 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 PIH1D2Q8WWB5 315 aa7.02□□□□□ -1.29
SHQ1-207ENST00000475558 PTPRN2Q92932 1015 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms