RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NR1D2Q14995 579 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 C16orf72Q14CZ0 275 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 PAFAH1B3Q15102 231 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 NFKBIBQ15653 356 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 LINC00303Q3SY05 128 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 TDRD12Q587J7 1177 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 ANKRD20A8PQ5CZ79 823 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 RALGPS1Q5JS13 557 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 CCDC122Q5T0U0 273 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ARMC12Q5T9G4 340 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ALKBH5Q6P6C2 394 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 SLC30A9Q6PML9 568 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 TRIM74Q86UV6 250 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ZFAND4Q86XD8 727 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ATPAF2Q8N5M1 289 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 CNTD1Q8N815 330 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 EXD3Q8N9H8 876 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 RCBTB1Q8NDN9 531 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 OR6C4Q8NGE1 309 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 RAPGEF5Q92565 580 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 USP7Q93009 1102 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 FAF2Q96CS3 445 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 WBP1Q96G27 269 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 CCNL2Q96S94 520 aaPredicted RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 NUDT22Q9BRQ3 303 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ABCG8Q9H221 673 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 NT5MQ9NPB1 228 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 RBM22Q9NW64 420 aaKnown RBP eCLIP7□□□□□ -1.291e-7■■■■■ 41.1
HDAC3-207ENST00000475549 TRNAU1APQ9NX07 287 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 PISDQ9UG56 409 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 ACSL6Q9UKU0 697 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 CNOT6Q9ULM6 557 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 CHKBQ9Y259 395 aa7□□□□□ -1.29
HDAC3-207ENST00000475549 FLNBO75369 2602 aaKnown RBP7□□□□□ -1.29
HDAC3-207ENST00000475549 ASH1LQ9NR48 2969 aaKnown RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TRBV23OR9-2A0A075B6M9 112 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 IGHV5-10-1A0A0J9YXX1 117 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 A0A0J9YYE9 177 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 A0A1W2PQ67 120 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 C3orf70A6NLC5 250 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TMX2-CTNND1H3BSU7 103 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 PSMD11O00231 422 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 PDE2AO00408 941 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 DNAJC6O75061 913 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 CLDN7O95471 211 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TRBC1P01850 177 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 ATP1A1P05023 1023 aaKnown RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 HLA-DQB2P05538 268 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 IVLP07476 585 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 FGF3P11487 239 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 CYP2A6P11509 494 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 MPSTP25325 297 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 CSF2RBP32927 897 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 STC1P52823 247 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 ILF3Q12906 894 aaKnown RBP eCLIP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 SQSTM1Q13501 440 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 ARHGEF7Q14155 803 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 KRT81Q14533 505 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 ZSCAN23Q3MJ62 389 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 AMZ1Q400G9 498 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 PYCR3Q53H96 274 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TAF1BQ53T94 588 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 BROXQ5VW32 411 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 DOK6Q6PKX4 331 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 ADAMTSL4Q6UY14 1074 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 CCDC81Q6ZN84 652 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 ZNF605Q86T29 641 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 NLRP8Q86W28 1048 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 DTX1Q86Y01 620 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 LRRC49Q8IUZ0 686 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 PAF1Q8N7H5 531 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 KCTD6Q8NC69 237 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 ZDHHC1Q8WTX9 485 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 AP2M1Q96CW1 435 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 CCDC97Q96F63 343 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 COX14Q96I36 57 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TMEM74Q96NL1 305 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TSGA13Q96PP4 275 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 RIOK2Q9BVS4 552 aaKnown RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TDRD1Q9BXT4 1180 aaKnown RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 GSDMCQ9BYG8 508 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 POLR1EQ9GZS1 481 aaKnown RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 PHPT1Q9NRX4 125 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TMEM9Q9P0T7 183 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 IFNKQ9P0W0 207 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 RCOR3Q9P2K3 495 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 LUC7L2Q9Y383 392 aaKnown RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 PRKAB1Q9Y478 270 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 PIEZO2Q9H5I5 2752 aa6.99□□□□□ -1.29
HDAC3-207ENST00000475549 TDRD6O60522 2096 aaKnown RBP6.99□□□□□ -1.29
HDAC3-207ENST00000475549 RP1P56715 2156 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 IGHV1OR21-1A0A087WYE8 117 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 GOLGA6CA6NDK9 693 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 GOLGA6BA6NDN3 693 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 FADS2P1A8MWK0 482 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 PYCARD-AS1I3L0S3 204 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 KCNK1O00180 336 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 INPP4BO15327 924 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 PROSCO94903 275 aa6.98□□□□□ -1.29
HDAC3-207ENST00000475549 CPNE6O95741 557 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms