RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ZFHX4Q86UP3 3567 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 C1orf232A0A0U1RR37 186 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 CAPN8A6NHC0 703 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 B4DGG1 531 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 PPP1R12AO14974 1030 aaPredicted RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 CASC3O15234 703 aaKnown RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 RRP8O43159 456 aaKnown RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 CLDN7O95471 211 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 CEACAM5P06731 702 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 ZNF30P17039 623 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 CYLC1P35663 651 aaPredicted RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 GNPDA1P46926 289 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 GABREP78334 506 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 IFI35P80217 286 aaPredicted RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 PTSQ03393 145 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 ZBTB17Q13105 803 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 IHHQ14623 411 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 PDK1Q15118 436 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 ISXQ2M1V0 245 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 C3orf38Q5JPI3 329 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 DOK6Q6PKX4 331 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 MFSD7Q6UXD7 560 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 LRRC69Q6ZNQ3 347 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 RBM44Q6ZP01 1051 aaKnown RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 RFLNAQ6ZTI6 216 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 KDELC2Q7Z4H8 507 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 TECPR1Q7Z6L1 1165 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 CCDC50Q8IVM0 306 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 CCDC170Q8IYT3 715 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 CBARPQ8N350 705 aaPredicted RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 CCL4L1Q8NHW4 92 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 SCAMP4Q969E2 229 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 CCDC74AQ96AQ1 378 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 AGAP3Q96P47 875 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 MLPHQ9BV36 600 aaPredicted RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 TEX101Q9BY14 249 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 ADGRE3Q9BY15 652 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 RBSNQ9H1K0 784 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 ABCG8Q9H221 673 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 GOLPH3Q9H4A6 298 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 DNPEPQ9ULA0 475 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 PCDHA13Q9Y5I0 950 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 ALG6Q9Y672 507 aa9.4□□□□□ -0.9
PDPN-204ENST00000475043 DMXL2Q8TDJ6 3036 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 INPP4BO15327 924 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 PSTPIP1O43586 416 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 TLX3O43711 291 aaPredicted RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 CST8O60676 142 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 TCEA3O75764 348 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 IPO7O95373 1038 aaKnown RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 PRLP01236 227 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 MMP2P08253 660 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 ACTN2P35609 894 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 EIF2S3P41091 472 aaKnown RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 CDKN2BP42772 138 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 POLD2P49005 469 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 ZNF75DP51815 510 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 STC1P52823 247 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 HADHBP55084 474 aaKnown RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 NAP1L1P55209 391 aaKnown RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 RPL26P61254 145 aaKnown RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 SKOR1P84550 965 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 DPTQ07507 201 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 ILF3Q12906 894 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDPN-204ENST00000475043 TFDP2Q14188 446 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 GALNT3Q14435 633 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 TCEAL1Q15170 157 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 PCSK7Q16549 785 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 NT5DC3Q86UY8 548 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 CNTD1Q8N815 330 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 Q8N9G6 341 aaPredicted RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 OR6C4Q8NGE1 309 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 WDR48Q8TAF3 677 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 KIAA1524Q8TCG1 905 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 CCHCR1Q8TD31 782 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 FGF11Q92914 225 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 ATXN7L3BQ96GX2 97 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 HIC2Q96JB3 615 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 GFM1Q96RP9 751 aaKnown RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 RIOK2Q9BVS4 552 aaKnown RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 GSDMCQ9BYG8 508 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 POLR1BQ9H9Y6 1135 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 SAE1Q9UBE0 346 aaPredicted RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 SUFUQ9UMX1 484 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 RPL26L1Q9UNX3 145 aaKnown RBP9.39□□□□□ -0.91
PDPN-204ENST00000475043 SATB2Q9UPW6 733 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 TMEM98Q9Y2Y6 226 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDPN-204ENST00000475043 ENTPD2Q9Y5L3 495 aa9.39□□□□□ -0.91
PDPN-204ENST00000475043 A0A087WV48 116 aa9.38□□□□□ -0.91
PDPN-204ENST00000475043 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
PDPN-204ENST00000475043 ANKRD66B4E2M5 251 aa9.38□□□□□ -0.91
PDPN-204ENST00000475043 ZRANB2O95218 330 aaKnown RBP eCLIP9.38□□□□□ -0.91
PDPN-204ENST00000475043 LCA5LO95447 670 aa9.38□□□□□ -0.91
PDPN-204ENST00000475043 ASMTLO95671 621 aa9.38□□□□□ -0.91
PDPN-204ENST00000475043 SLC4A1P02730 911 aa9.38□□□□□ -0.91
PDPN-204ENST00000475043 FUCA1P04066 466 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms