RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 DTD1Q8TEA8 209 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 CPA5Q8WXQ8 436 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TAMM41Q96BW9 452 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 RHBDF1Q96CC6 855 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PAGE5Q96GU1 130 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 NACC1Q96RE7 527 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 UHRF1Q96T88 793 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 DPYSL5Q9BPU6 564 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ACBD6Q9BR61 282 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 NOC4LQ9BVI4 516 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TRIM55Q9BYV6 548 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 C6orf62Q9GZU0 229 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TMEM245Q9H330 911 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TREM1Q9NP99 234 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 FAM120CQ9NX05 1096 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ZDHHC7Q9NXF8 308 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 MAD2L2Q9UI95 211 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 CYTH4Q9UIA0 394 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PCDHA6Q9UN73 950 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PIN4Q9Y237 131 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 B3GNT3Q9Y2A9 372 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TCAF1Q9Y4C2 921 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PCDHA8Q9Y5H6 950 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TRABD2BA6NFA1 517 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 SLC15A5A6NIM6 579 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 HRKO00198 91 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 CCNT2O60583 730 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 RHOBTB1O94844 696 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PGK1P00558 417 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ASS1P00966 412 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 FBP1P09467 338 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TPTEP56180 551 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 RPS8P62241 208 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 SPIRE1Q08AE8 756 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 COL9A3Q14050 684 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 MBTPS1Q14703 1052 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ZBTB6Q15916 424 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PPP2R5EQ16537 467 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 YIF1BQ5BJH7 314 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 C10orf120Q5SQS8 335 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 NADSYN1Q6IA69 706 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 CNKSR3Q6P9H4 555 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 APOA5Q6Q788 366 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 SMIM5Q71RC9 77 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 LINC00523Q86TU6 105 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 NLRX1Q86UT6 975 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 MICU3Q86XE3 530 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 STX12Q86Y82 276 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 RAB43Q86YS6 212 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 RCOR2Q8IZ40 523 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 DSELQ8IZU8 1212 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 NAGSQ8N159 534 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 UBLCP1Q8WVY7 318 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 GDAP1L1Q96MZ0 367 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 DERL2Q9GZP9 239 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ASCC2Q9H1I8 757 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TLE6Q9H808 572 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 KLQ9UEF7 1012 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 SLC24A2Q9UI40 661 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ABT1Q9ULW3 272 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 MYH4Q9Y623 1939 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 GMNCA6NCL1 334 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 FAM205CA6NFA0 338 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PGPEP1LA6NFU8 196 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 KLRF2D3W0D1 207 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 POP7O75817 140 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 OR7A10O76100 309 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 LDOC1O95751 146 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 HCKP08631 526 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 HOXD8P13378 290 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 G0S2P27469 103 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 MC4RP32245 332 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 CDKN1BP46527 198 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ANXA11P50995 505 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 GBX2P52951 348 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PLK1P53350 603 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ART3Q13508 389 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ZNF273Q14593 569 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PUM1Q14671 1186 aaKnown RBP eCLIP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 STARD3Q14849 445 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ERMARDQ5T6L9 678 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TDRD10Q5VZ19 366 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 KRT40Q6A162 431 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 FRMPD2BQ6IN97 320 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 USP49Q70CQ1 688 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 BHLHA15Q7RTS1 189 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ZNF410Q86VK4 478 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 CDKL3Q8IVW4 592 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 LNX2Q8N448 690 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 C1orf216Q8TAB5 229 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 OR1E3Q8WZA6 343 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ZDHHC12Q96GR4 267 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 RANBP3Q9H6Z4 567 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 TRIM45Q9H8W5 580 aaPredicted RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 PRDM7Q9NQW5 492 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 CNOT8Q9UFF9 292 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 EGFL7Q9UHF1 273 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 ANGEL1Q9UNK9 670 aaKnown RBP4.88□□□□□ -1.63
NPHP3-206ENST00000474871 COPS3Q9UNS2 423 aa4.88□□□□□ -1.63
NPHP3-206ENST00000474871 UTP11Q9Y3A2 253 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms