RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 ZNF28P17035 718 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 SDC4P31431 198 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 CASP14P31944 242 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 STX17P56962 302 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 HHEXQ03014 270 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 BCL2L1Q07817 233 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 SEMA5AQ13591 1074 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 EXOC3L4Q17RC7 722 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 DENND2CQ68D51 928 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 ELOA2Q8IYF1 753 aaPredicted RBP13.2□□□□□ -0.3
RTN4R-206ENST00000474642 PDCD6IPQ8WUM4 868 aaKnown RBP13.2□□□□□ -0.3
RTN4R-206ENST00000474642 TCTN2Q96GX1 697 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 COQ10AQ96MF6 247 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 TIGD1Q96MW7 591 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 OR2M4Q96R27 311 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 TRIM55Q9BYV6 548 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 STN1Q9H668 368 aaKnown RBP13.2□□□□□ -0.3
RTN4R-206ENST00000474642 KCTD5Q9NXV2 234 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
RTN4R-206ENST00000474642 SLC17A4Q9Y2C5 497 aa13.2□□□□□ -0.3
RTN4R-206ENST00000474642 ZNF106Q9H2Y7 1883 aaKnown RBP13.2□□□□□ -0.3
RTN4R-206ENST00000474642 DIDO1Q9BTC0 2240 aaKnown RBP13.2□□□□□ -0.3
RTN4R-206ENST00000474642 KIAA0754O94854 1291 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 RECKO95980 971 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 MBD3O95983 291 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 CCNYL3P0C7X3 344 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 VARSP26640 1264 aaKnown RBP13.19□□□□□ -0.3
RTN4R-206ENST00000474642 CSNK1DP48730 415 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 NFATC2Q13469 925 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 CCDC14Q49A88 953 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 PRR30Q53SZ7 412 aaPredicted RBP13.19□□□□□ -0.3
RTN4R-206ENST00000474642 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.19□□□□□ -0.3
RTN4R-206ENST00000474642 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 RAET1GQ6H3X3 334 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 RASGRP3Q8IV61 690 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 SFRP1Q8N474 314 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 CCDC185Q8N715 623 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 RXFP2Q8WXD0 754 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 ECHDC3Q96DC8 303 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 C5orf34Q96MH7 638 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 SLAMF7Q9NQ25 335 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 B4GALT6Q9UBX8 382 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 DNAJC12Q9UKB3 198 aa13.19□□□□□ -0.3
RTN4R-206ENST00000474642 ITPR3Q14573 2671 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 PPP1R3GB7ZBB8 358 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 J3KR12 359 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 LRCH4O75427 683 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 PALMO75781 387 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
RTN4R-206ENST00000474642 PON1P27169 355 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 RGRP47804 291 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 CCL11P51671 97 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 DNASE1L3Q13609 305 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 NAA30Q147X3 362 aaPredicted RBP13.18□□□□□ -0.3
RTN4R-206ENST00000474642 SMYD5Q6GMV2 418 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 PLXDC1Q8IUK5 500 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 SLC34A3Q8N130 599 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 PYROXD2Q8N2H3 581 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 TSEN2Q8NCE0 465 aaKnown RBP13.18□□□□□ -0.3
RTN4R-206ENST00000474642 CPA5Q8WXQ8 436 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 SH3KBP1Q96B97 665 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 CATSPERBQ9H7T0 1116 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 ACSS2Q9NR19 701 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 LUZP4Q9P127 313 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 LNPEPQ9UIQ6 1025 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 AJAP1Q9UKB5 411 aaPredicted RBP13.18□□□□□ -0.3
RTN4R-206ENST00000474642 MAN1B1Q9UKM7 699 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 PADI1Q9ULC6 663 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 SLC5A6Q9Y289 635 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 TMEM98Q9Y2Y6 226 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 PCDHGA9Q9Y5G4 932 aaKnown RBP13.18□□□□□ -0.3
RTN4R-206ENST00000474642 PCDHGA6Q9Y5G7 932 aa13.18□□□□□ -0.3
RTN4R-206ENST00000474642 CSMD1Q96PZ7 3565 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 CREB3O43889 395 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 PRAMEF11O60813 436 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 NDUFA10O95299 355 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 LSM8O95777 96 aaKnown RBP13.17□□□□□ -0.3
RTN4R-206ENST00000474642 CYP11B1P15538 503 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 ETV3P41162 512 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 GARSP41250 739 aaKnown RBP13.17□□□□□ -0.3
RTN4R-206ENST00000474642 EPHA4P54764 986 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 PAK1Q13153 545 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 CNGA3Q16281 694 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 JMJD6Q6NYC1 403 aaPredicted RBP13.17□□□□□ -0.3
RTN4R-206ENST00000474642 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
RTN4R-206ENST00000474642 SLFN11Q7Z7L1 901 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 TP53INP2Q8IXH6 220 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 UMODL1-AS1Q8N2C9 162 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 DTD2Q96FN9 168 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 SCARF2Q96GP6 870 aaPredicted RBP13.17□□□□□ -0.3
RTN4R-206ENST00000474642 ELMO2Q96JJ3 720 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 CINPQ9BW66 212 aaPredicted RBP13.17□□□□□ -0.3
RTN4R-206ENST00000474642 PDFQ9HBH1 243 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 SARS2Q9NP81 518 aaKnown RBP13.17□□□□□ -0.3
RTN4R-206ENST00000474642 SIDT1Q9NXL6 827 aaKnown RBP13.17□□□□□ -0.3
RTN4R-206ENST00000474642 ZNF451Q9Y4E5 1061 aa13.17□□□□□ -0.3
RTN4R-206ENST00000474642 WASH4PA8MWX3 477 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms