RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 SUFUQ9UMX1 484 aa20.3■□□□□ 0.84
PDLIM4-206ENST00000474421 PCDHGA7Q9Y5G6 932 aa20.3■□□□□ 0.84
PDLIM4-206ENST00000474421 MGAQ8IWI9 3026 aa20.3■□□□□ 0.84
PDLIM4-206ENST00000474421 CAPN8A6NHC0 703 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 ZNF487B1APH4 448 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 ARHGAP25P42331 645 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 RHDQ02161 417 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 PTSQ03393 145 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 GBE1Q04446 702 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 CLPPQ16740 277 aaPredicted RBP20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 CPNE8Q86YQ8 564 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 CCDC13Q8IYE1 715 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 PQLC3Q8N755 202 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 CCNYQ8ND76 341 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 ANP32EQ9BTT0 268 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 CDH19Q9H159 772 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 ABCG8Q9H221 673 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 SUDS3Q9H7L9 328 aaPredicted RBP20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 SPATS2LQ9NUQ6 558 aaKnown RBP20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 TAAR2Q9P1P5 351 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 CHKBQ9Y259 395 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 SSUH2Q9Y2M2 353 aa20.29■□□□□ 0.84
PDLIM4-206ENST00000474421 RHPN2P1A8MT19 583 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 ERVH48-1M5A8F1 160 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 MAP3K6O95382 1288 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 FGF1P05230 155 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 JMJD7P0C870 316 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 KDELR1P24390 212 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 UGT1A5P35504 534 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 STC1P52823 247 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 ZFP36L1Q07352 338 aaKnown RBP20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 BIRC2Q13490 618 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 MESDQ14696 234 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 PTPRRQ15256 657 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 C17orf82Q86X59 251 aaPredicted RBP20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 VSIG1Q86XK7 387 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 NRROSQ86YC3 692 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 ARRDC2Q8TBH0 407 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 SCARF2Q96GP6 870 aaPredicted RBP20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 RNF157Q96PX1 679 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 PCDH9Q9HC56 1237 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 CD84Q9UIB8 345 aa20.28■□□□□ 0.84
PDLIM4-206ENST00000474421 PMS2P1A4D2B8 440 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 FUCA1P04066 466 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 HLA-DQB2P05538 268 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 ADCY8P40145 1251 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 CTBSQ01459 385 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 VAC14Q08AM6 782 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 ARHGAP40Q5TG30 622 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 DOK6Q6PKX4 331 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 SLC30A9Q6PML9 568 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 ZNF438Q7Z4V0 828 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 RHOT2Q8IXI1 618 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 EXD1Q8NHP7 514 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 SLC35G2Q8TBE7 412 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 SNRNP27Q8WVK2 155 aaKnown RBP20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 RAPGEF5Q92565 580 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 CCDC42Q96M95 316 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 LYSMD1Q96S90 227 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 CMKLR1Q99788 373 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 MAK16Q9BXY0 300 aaKnown RBP20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 CPNE5Q9HCH3 593 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 DTLQ9NZJ0 730 aa20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 AKAP7Q9P0M2 348 aaPredicted RBP20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 ATXN7L1Q9ULK2 861 aaPredicted RBP20.27■□□□□ 0.84
PDLIM4-206ENST00000474421 ZFC3H1O60293 1989 aaKnown RBP20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 SCN8AQ9UQD0 1980 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 LRRD1A4D1F6 860 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 CPNE6O95741 557 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 SOD1P00441 154 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 PRLP01236 227 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 AK4P27144 223 aaPredicted RBP20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 GPR3P46089 330 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 POLD2P49005 469 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 MAZP56270 477 aaKnown RBP20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 B4GALNT1Q00973 533 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 PPIDQ08752 370 aaKnown RBP20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 NIPAL4Q0D2K0 466 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 C19orf57Q0VDD7 668 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 NR1D2Q14995 579 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 MAP9Q49MG5 647 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 RFLNAQ6ZTI6 216 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 PIM3Q86V86 326 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 JAMLQ86YT9 394 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 SFTPA2Q8IWL1 248 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 LPCAT1Q8NF37 534 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 SCAMP4Q969E2 229 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 WBP1Q96G27 269 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 OR2M4Q96R27 311 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 ADGRE3Q9BY15 652 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 ABHD10Q9NUJ1 306 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 ACSL6Q9UKU0 697 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 LOXL2Q9Y4K0 774 aa20.26■□□□□ 0.83
PDLIM4-206ENST00000474421 KALRNO60229 2985 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 AHCTF1Q8WYP5 2266 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 RGSL1A5PLK6 1076 aa20.25■□□□□ 0.83
PDLIM4-206ENST00000474421 NVLO15381 856 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms