RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TRIB3Q96RU7 358 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 RIOK2Q9BVS4 552 aaKnown RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 TEX101Q9BY14 249 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 MRPL40Q9NQ50 206 aaKnown RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 KLK13Q9UKR3 277 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 PNMA8BQ9ULN7 279 aaPredicted RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 DNAH14Q0VDD8 3507 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 LMO7DNF2Z398 122 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 YY2O15391 372 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 SPINT3P49223 89 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 RPIAP49247 311 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 ACADVLP49748 655 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 ILKQ13418 452 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 ANKRD20A2Q5SQ80 823 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 ANKRD20A1Q5TYW2 823 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 ANKRD20A3Q5VUR7 823 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 DOK6Q6PKX4 331 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 ZNF662Q6ZS27 426 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 TAF8Q7Z7C8 310 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 RAVER1Q8IY67 606 aaKnown RBP14.17□□□□□ -0.14
VAMP4-203ENST00000474047 SDR16C5Q8N3Y7 309 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 OR1E3Q8WZA6 343 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 TADA1Q96BN2 335 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 PDXPQ96GD0 296 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 GBA3Q9H227 469 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 USP29Q9HBJ7 922 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 FGF22Q9HCT0 170 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 RAD18Q9NS91 495 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 PPP2R2CQ9Y2T4 447 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 NEUROG3Q9Y4Z2 214 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 DGKBQ9Y6T7 804 aa14.17□□□□□ -0.14
VAMP4-203ENST00000474047 ARID1BQ8NFD5 2236 aaPredicted RBP14.16□□□□□ -0.14
VAMP4-203ENST00000474047 PRSS38A1L453 326 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 CPED1A4D0V7 1026 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 RGSL1A5PLK6 1076 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 INPP4BO15327 924 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 ASMTLO95671 621 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 EPOP01588 193 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 CKMT1AP12532 417 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 ACP1P24666 158 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 TEAD1P28347 426 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 NR0B2Q15466 257 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 MEI1Q5TIA1 1274 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 KDELC1Q6UW63 502 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 ARHGEF18Q6ZSZ5 1173 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 NLRP8Q86W28 1048 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 FAM181AQ8N9Y4 354 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 TRIM58Q8NG06 486 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 HIC2Q96JB3 615 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 PPP1R2P1Q96PQ5 205 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 CLPBQ9H078 707 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 ABCG4Q9H172 646 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 CARS2Q9HA77 564 aaKnown RBP14.16□□□□□ -0.14
VAMP4-203ENST00000474047 GULP1Q9UBP9 304 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 AAR2Q9Y312 384 aaKnown RBP14.16□□□□□ -0.14
VAMP4-203ENST00000474047 ZNF711Q9Y462 761 aa14.16□□□□□ -0.14
VAMP4-203ENST00000474047 GIMD1P0DJR0 217 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 MYF5P13349 255 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 E2F1Q01094 437 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 CDKN3Q16667 212 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 LVRNQ6Q4G3 990 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 ADAMTSL4Q6UY14 1074 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 CCDC110Q8TBZ0 833 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 OXNAD1Q96HP4 312 aaPredicted RBP14.15□□□□□ -0.14
VAMP4-203ENST00000474047 MRGPRX2Q96LB1 330 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 SPATA13Q96N96 652 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 SPATA16Q9BXB7 569 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 SIRPGQ9P1W8 387 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 GPR34Q9UPC5 381 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 MSRB2Q9Y3D2 182 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 LOC285095A0A1B0GVY8 99 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 CELA2BP08218 269 aaPredicted RBP14.15□□□□□ -0.14
VAMP4-203ENST00000474047 JUPP14923 745 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 HLA-DPA1P20036 260 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 GNPDA1P46926 289 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 SLC1A5Q15758 541 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 SIRPB2Q5JXA9 342 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 C6orf132Q5T0Z8 1188 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 ALS2CLQ60I27 953 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 NYAP1Q6ZVC0 841 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 FAM71DQ8N9W8 422 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 BLOC1S5Q8TDH9 187 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 CNTNAP3BQ96NU0 1288 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 AGAP2Q99490 1192 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 FICDQ9BVA6 458 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 CNTNAP3Q9BZ76 1288 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 TMEM168Q9H0V1 697 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 CDH19Q9H159 772 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 TRABDQ9H4I3 376 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 HACD3Q9P035 362 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 WASF3Q9UPY6 502 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 TMEM98Q9Y2Y6 226 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 GPSM3Q9Y4H4 160 aa14.15□□□□□ -0.14
VAMP4-203ENST00000474047 GOLGA4Q13439 2230 aaKnown RBP14.14□□□□□ -0.15
VAMP4-203ENST00000474047 TCRBV7S2A1N4TA0A589 114 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 DKK1O94907 266 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 FGF1P05230 155 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 CEACAM5P06731 702 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 PSMB4P28070 264 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms