RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RBP5P82980 135 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 PLIN5Q00G26 463 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 TFF2Q03403 129 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 CXCL9Q07325 125 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 GRSF1Q12849 480 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 BFSP1Q12934 665 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 IGSF11Q5DX21 431 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 C1QTNF12Q5T7M4 302 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 FBXO46Q6PJ61 603 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 IL27RAQ6UWB1 636 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 PQLC2Q6ZP29 291 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 TSPAN33Q86UF1 283 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 METTL23Q86XA0 190 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 LDLRAD3Q86YD5 345 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 CNGA4Q8IV77 575 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 GUF1Q8N442 669 aaKnown RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 OR6J1Q8NGC5 347 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 SETD6Q8TBK2 473 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 IGSF8Q969P0 613 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 EME1Q96AY2 570 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 ACOX2Q99424 681 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 AGAP2Q99490 1192 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 TMEM79Q9BSE2 394 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 GRPEL1Q9HAV7 217 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 EPB41L5Q9HCM4 733 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 HINT3Q9NQE9 182 aaKnown RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 PDGFCQ9NRA1 345 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 STK26Q9P289 416 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 IL17BQ9UHF5 180 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 OSGIN1Q9UJX0 560 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 PADI1Q9ULC6 663 aa4.3□□□□□ -1.72
BRCA1-212ENST00000473961 TTC7AQ9ULT0 858 aaPredicted RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 POLR2AP24928 1970 aaKnown RBP4.3□□□□□ -1.72
BRCA1-212ENST00000473961 LOC102723996A0A087X1L8 192 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 GPR75-ASB3A0A0A6YYF3 556 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 LNP1A1A4G5 178 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 H0YIN7 160 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 VCYO14598 125 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 ATP2A1O14983 1001 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 TLX3O43711 291 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-212ENST00000473961 TUBBP07437 444 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 FDPSP14324 419 aaKnown RBP4.29□□□□□ -1.72
BRCA1-212ENST00000473961 MMP9P14780 707 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 GLULP15104 373 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 CHRNB2P17787 502 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 PROZP22891 400 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 ACADLP28330 430 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 ME1P48163 572 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 ALDH7A1P49419 539 aaKnown RBP4.29□□□□□ -1.72
BRCA1-212ENST00000473961 ENTPD1P49961 510 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 RAB28P51157 221 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 SREBF2Q12772 1141 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 GRIK2Q13002 908 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 INPP5JQ15735 1006 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-212ENST00000473961 ZNF628Q5EBL2 1059 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 EPHA10Q5JZY3 1008 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 ARMC4Q5T2S8 1044 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 LRIF1Q5T3J3 769 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 NUGGCQ68CJ6 796 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 ZNF788Q6ZQV5 615 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 HAPLN4Q86UW8 402 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 DSELQ8IZU8 1212 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 HJURPQ8NCD3 748 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-212ENST00000473961 PRSS3P2Q8NHM4 247 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 PTPMT1Q8WUK0 201 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-212ENST00000473961 LPGAT1Q92604 370 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 LPAR1Q92633 364 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 FAM162AQ96A26 154 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 HDAC11Q96DB2 347 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 GAD1Q99259 594 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 TMEM39BQ9GZU3 492 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 RIOX1Q9H6W3 641 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 CATSPERBQ9H7T0 1116 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 DNAJC18Q9H819 358 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 FZD3Q9NPG1 666 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 PIH1D3Q9NQM4 214 aaKnown RBP4.29□□□□□ -1.72
BRCA1-212ENST00000473961 DECR2Q9NUI1 292 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 MRGBPQ9NV56 204 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 FLRT1Q9NZU1 646 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 SELENONQ9NZV5 590 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 OR14J1Q9UGF5 321 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 DBNLQ9UJU6 430 aaKnown RBP4.29□□□□□ -1.72
BRCA1-212ENST00000473961 RCOR1Q9UKL0 485 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 GTF3C4Q9UKN8 822 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 PLAGL1Q9UM63 463 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 STON1Q9Y6Q2 735 aa4.29□□□□□ -1.72
BRCA1-212ENST00000473961 FANCIQ9NVI1 1328 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 C1orf226A1L170 272 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 MANSC4A6NHS7 340 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 KDM4EB2RXH2 506 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 SMAD9O15198 467 aaKnown RBP4.28□□□□□ -1.72
BRCA1-212ENST00000473961 BCAR3O75815 825 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 GH2P01242 217 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 IFNA2P01563 188 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 PPP3CCP48454 512 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 CXCR3P49682 368 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 RASSF2P50749 326 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 CCR3P51677 355 aa4.28□□□□□ -1.72
BRCA1-212ENST00000473961 PPP5CP53041 499 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms