RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 YKT6O15498 198 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 CRTAMO95727 393 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 KELP23276 732 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 HMGCLP35914 325 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 TRIM23P36406 574 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 IL9RQ01113 521 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 CDH17Q12864 832 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 SLC14A1Q13336 389 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 FZD2Q14332 565 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 NFATC4Q14934 902 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 SUZ12Q15022 739 aaKnown RBP12.37□□□□□ -0.43
DDX56-209ENST00000473924 PPP1R7Q15435 360 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 TAF1AQ15573 450 aaPredicted RBP12.37□□□□□ -0.43
DDX56-209ENST00000473924 KCTD19Q17RG1 926 aaPredicted RBP12.37□□□□□ -0.43
DDX56-209ENST00000473924 RSPO4Q2I0M5 234 aaPredicted RBP12.37□□□□□ -0.43
DDX56-209ENST00000473924 ZNF542PQ5EBM4 170 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 ALS2CLQ60I27 953 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 ENPP7Q6UWV6 458 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 MACC1Q6ZN28 852 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 NLRP8Q86W28 1048 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 HEATR4Q86WZ0 1026 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 PELI3Q8N2H9 469 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 OR52K1Q8NGK4 314 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 FUBP1Q96AE4 644 aaKnown RBP12.37□□□□□ -0.43
DDX56-209ENST00000473924 EID2BQ96D98 161 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 RUNDC3BQ96NL0 473 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 SPATA16Q9BXB7 569 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 CDH19Q9H159 772 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 GPR27Q9NS67 375 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 PIH1D1Q9NWS0 290 aaKnown RBP12.37□□□□□ -0.43
DDX56-209ENST00000473924 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
DDX56-209ENST00000473924 TMEM131Q92545 1883 aa12.37□□□□□ -0.43
DDX56-209ENST00000473924 KIF2AO00139 706 aaPredicted RBP12.36□□□□□ -0.43
DDX56-209ENST00000473924 STX7O15400 261 aaKnown RBP12.36□□□□□ -0.43
DDX56-209ENST00000473924 BUD23O43709 281 aaKnown RBP12.36□□□□□ -0.43
DDX56-209ENST00000473924 PPFIA2O75334 1257 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 SUN1O94901 812 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 TUBB4AP04350 444 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 ZNF883P0CG24 379 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 MYCLP1P12525 358 aaPredicted RBP12.36□□□□□ -0.43
DDX56-209ENST00000473924 BPIP17213 487 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 TPH1P17752 444 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 LPOP22079 712 aaPredicted RBP12.36□□□□□ -0.43
DDX56-209ENST00000473924 TEAD1P28347 426 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 KIAA1024LP59773 190 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 DCDC1P59894 354 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 HNRNPKP61978 463 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX56-209ENST00000473924 PDE1BQ01064 536 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 SEPT6Q14141 434 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 TPRG1LQ5T0D9 272 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 ZDHHC20Q5W0Z9 365 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 TTC30BQ8N4P2 665 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 GPR26Q8NDV2 337 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 BRSK1Q8TDC3 778 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 WDR92Q96MX6 357 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 PLEKHG4BQ96PX9 1271 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 AGAP2Q99490 1192 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 ZSCAN5AQ9BUG6 496 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 LGR4Q9BXB1 951 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 TEX101Q9BY14 249 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 EIF2B3Q9NR50 452 aaKnown RBP12.36□□□□□ -0.43
DDX56-209ENST00000473924 KLQ9UEF7 1012 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 MOSPD1Q9UJG1 213 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 ARL5AQ9Y689 179 aa12.36□□□□□ -0.43
DDX56-209ENST00000473924 SLC30A4O14863 429 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 INPP4BO15327 924 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 SDC3O75056 442 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 URI1O94763 535 aaPredicted RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 CSF2P04141 144 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 HOXC4P09017 264 aaPredicted RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 JUNDP17535 347 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 EPHA8P29322 1005 aaPredicted RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 SPAM1P38567 509 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 RXRGP48443 463 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 BLKP51451 505 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 SARNPP82979 210 aaKnown RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 CDK3Q00526 305 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 CDK16Q00536 496 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 DR1Q01658 176 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 PPARDQ03181 441 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 EIF2B5Q13144 721 aaKnown RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 POU6F1Q14863 301 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 INAVAQ3KP66 663 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 HENMT1Q5T8I9 393 aaKnown RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 ADAMTSL4Q6UY14 1074 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 RD3Q7Z3Z2 195 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 GATAD2AQ86YP4 633 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 HID1Q8IV36 788 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 TRAM1L1Q8N609 369 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 OR4K2Q8NGD2 314 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 OR56A4Q8NGH8 313 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 SETD7Q8WTS6 366 aaKnown RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 BTN2A2Q8WVV5 523 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 TSACCQ96A04 125 aaPredicted RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 HIC2Q96JB3 615 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 SLC13A1Q9BZW2 595 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 IL17CQ9P0M4 197 aa12.35□□□□□ -0.43
DDX56-209ENST00000473924 APOBEC3BQ9UH17 382 aaKnown RBP12.35□□□□□ -0.43
DDX56-209ENST00000473924 ASIC3Q9UHC3 531 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms