RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SPINT3P49223 89 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 RPS6KA1Q15418 735 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 SIRPB2Q5JXA9 342 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 SEL1L2Q5TEA6 688 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 TRIM74Q86UV6 250 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 TTC13Q8NBP0 860 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 IPMKQ8NFU5 416 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 APOLD1Q96LR9 279 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 SPATA13Q96N96 652 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 ALS2CR12Q96Q35 445 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 FRMD8Q9BZ67 464 aaPredicted RBP18.87■□□□□ 0.61
PTCD3-210ENST00000473829 MAGEE1Q9HCI5 957 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 PHPT1Q9NRX4 125 aaPredicted RBP18.87■□□□□ 0.61
PTCD3-210ENST00000473829 DGKBQ9Y6T7 804 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 PLXNB3Q9ULL4 1909 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 CEP295Q9C0D2 2601 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 NEMP2A6NFY4 417 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 FUCA1P04066 466 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 ALPPL2P10696 532 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 CKMT2P17540 419 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 GPR1P46091 355 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 GDF10P55107 478 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 MPP3Q13368 585 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 OLIG2Q13516 323 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 HENMT1Q5T8I9 393 aaKnown RBP18.86■□□□□ 0.61
PTCD3-210ENST00000473829 DHRS13Q6UX07 377 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 ADAMTSL4Q6UY14 1074 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 SLC13A5Q86YT5 568 aaPredicted RBP18.86■□□□□ 0.61
PTCD3-210ENST00000473829 NRSN1Q8IZ57 195 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 SLC25A41Q8N5S1 370 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 ATL2Q8NHH9 583 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 TLR10Q9BXR5 811 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 ZFYVE1Q9HBF4 777 aa18.86■□□□□ 0.61
PTCD3-210ENST00000473829 GOLGA4Q13439 2230 aaKnown RBP18.86■□□□□ 0.61
PTCD3-210ENST00000473829 PRSS38A1L453 326 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 FADS2P1A8MWK0 482 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 LMO7DNF2Z398 122 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 TNFRSF10CO14798 259 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 YY2O15391 372 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 RFPL3O75679 317 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 CEACAM5P06731 702 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 KELP23276 732 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 ACP1P24666 158 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 BLKP51451 505 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 CLDN6P56747 220 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 SLC1A5Q15758 541 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 ITPRIPL1Q6GPH6 555 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 ZCCHC8Q6NZY4 707 aaKnown RBP18.85■□□□□ 0.61
PTCD3-210ENST00000473829 TMC3Q7Z5M5 1100 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 NLRP8Q86W28 1048 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 RAVER1Q8IY67 606 aaKnown RBP18.85■□□□□ 0.61
PTCD3-210ENST00000473829 FAM71DQ8N9W8 422 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 FAM181AQ8N9Y4 354 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 CCHCR1Q8TD31 782 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 PDLIM2Q96JY6 352 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 FERMT1Q9BQL6 677 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 TMEM121Q9BTD3 319 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 FICDQ9BVA6 458 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 DUSP23Q9BVJ7 150 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 CARD9Q9H257 536 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 CYP4F12Q9HCS2 524 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 PKD2L2Q9NZM6 624 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 PCDHGA1Q9Y5H4 931 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 BPTFQ12830 3046 aa18.85■□□□□ 0.61
PTCD3-210ENST00000473829 MYLKQ15746 1914 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 CHD8Q9HCK8 2581 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 TPP1O14773 563 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 INPP4BO15327 924 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 STK10O94804 968 aaKnown RBP18.84■□□□□ 0.61
PTCD3-210ENST00000473829 AGTP01019 485 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 TNFP01375 233 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 EPOP01588 193 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 CTSEP14091 401 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 POLD2P49005 469 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 GEMP55040 296 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 DAB2P98082 770 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 HS1BP3Q53T59 392 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 ALS2CLQ60I27 953 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 DOK6Q6PKX4 331 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 MARCH9Q86YJ5 346 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 FSTL5Q8N475 847 aaPredicted RBP18.84■□□□□ 0.61
PTCD3-210ENST00000473829 GPR26Q8NDV2 337 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 TRIM58Q8NG06 486 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 CCL4L1Q8NHW4 92 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 UBE2Q2Q8WVN8 375 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 COX14Q96I36 57 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 GPR63Q9BZJ6 419 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 TMEM168Q9H0V1 697 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 FAM83DQ9H4H8 585 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 SUDS3Q9H7L9 328 aaPredicted RBP18.84■□□□□ 0.61
PTCD3-210ENST00000473829 MOSPD1Q9UJG1 213 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 CNOT6Q9ULM6 557 aaKnown RBP18.84■□□□□ 0.61
PTCD3-210ENST00000473829 SLC17A4Q9Y2C5 497 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 TMEM98Q9Y2Y6 226 aa18.84■□□□□ 0.61
PTCD3-210ENST00000473829 C5orf60A6NFR6 353 aa18.83■□□□□ 0.6
PTCD3-210ENST00000473829 PDE2AO00408 941 aaPredicted RBP18.83■□□□□ 0.6
PTCD3-210ENST00000473829 LIASO43766 372 aa18.83■□□□□ 0.6
PTCD3-210ENST00000473829 ANXA9O76027 345 aa18.83■□□□□ 0.6
PTCD3-210ENST00000473829 ANXA6P08133 673 aa18.83■□□□□ 0.6
PTCD3-210ENST00000473829 CKMT1AP12532 417 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms