RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 RAD51Q06609 339 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 DAG1Q14118 895 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 AARS2Q5JTZ9 985 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 FAM72AQ5TYM5 149 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 DENND5AQ6IQ26 1287 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 FAM72DQ6L9T8 149 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 NCCRP1Q6ZVX7 275 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 OTOP3Q7RTS5 596 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 FAM72BQ86X60 149 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 CENPSQ8N2Z9 138 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 NKAPQ8N5F7 415 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 SETD9Q8NE22 299 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PHF21BQ96EK2 531 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 ZNF512Q96ME7 567 aaPredicted RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 ZBTB18Q99592 522 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 C16orf70Q9BSU1 422 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 EIF2AQ9BY44 585 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 PDGFCQ9NRA1 345 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 SCAF8Q9UPN6 1271 aaKnown RBP6.11□□□□□ -1.43
HERC4-209ENST00000473533 PCDHB3Q9Y5E6 796 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PCDHGA4Q9Y5G9 962 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 PCDHA9Q9Y5H5 950 aa6.11□□□□□ -1.43
HERC4-209ENST00000473533 SCN1AP35498 2009 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 KERAO60938 352 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CNOT3O75175 753 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 PMPCBO75439 489 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 EGFRP00533 1210 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 UROSP10746 265 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ODC1P11926 461 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 HGFP14210 728 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FDXRP22570 491 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 GMPRP36959 345 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SUOXP51687 545 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 RAD23AP54725 363 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 LIPEQ05469 1076 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 TRAF2Q12933 501 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 MAD2L1Q13257 205 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 PMS2P3Q13401 168 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 OLIG2Q13516 323 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 KRR1Q13601 381 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 RCAN2Q14206 197 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 UNC50Q53HI1 259 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 IQSEC1Q6DN90 963 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 PTAR1Q7Z6K3 402 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 OSTM1Q86WC4 334 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ZDHHC13Q8IUH4 622 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CMTR2Q8IYT2 770 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 FAM9CQ8IZT9 166 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CLEC4FQ8N1N0 589 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FBXO39Q8N4B4 442 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 PTGR2Q8N8N7 351 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 RTL3Q8N8U3 475 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 OR56A4Q8NGH8 313 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 OR6P1Q8NGX9 317 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 HMGCLL1Q8TB92 370 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 MAGEE2Q8TD90 523 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 TMEM125Q96AQ2 219 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 EFHD2Q96C19 240 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 NXF3Q9H4D5 531 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 ALG9Q9H6U8 611 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 KCNH4Q9UQ05 1017 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 COMMD10Q9Y6G5 202 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 TNS1Q9HBL0 1735 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 DICER1Q9UPY3 1922 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 SLC22A1O15245 554 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 MAFKO60675 156 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 E2F6O75461 281 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SLC22A3O75751 556 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FKBP9O95302 570 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CYBBP04839 570 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FGF1P05230 155 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ANXA6P08133 673 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 MSH3P20585 1137 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ARNTP27540 789 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ERVK-8P63133 956 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 PITX1P78337 314 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 GSTM4Q03013 218 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 PRKG2Q13237 762 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ZNF460Q14592 562 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FXNQ16595 210 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SMU1Q2TAY7 513 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CYBRD1Q53TN4 286 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ANKRD26P1Q6NSI1 321 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 ISLR2Q6UXK2 745 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FAM43BQ6ZT52 329 aaPredicted RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 TFAP2DQ7Z6R9 452 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 HID1Q8IV36 788 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 FUNDC1Q8IVP5 155 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 TMEM199Q8N511 208 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SCAIQ8N9R8 606 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 PIK3C3Q8NEB9 887 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 OR6J1Q8NGC5 347 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 CELF6Q96J87 481 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 MRGPRX2Q96LB1 330 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SENP8Q96LD8 212 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 C1orf74Q96LT6 269 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 SERPINB11Q96P15 392 aa6.1□□□□□ -1.43
HERC4-209ENST00000473533 RBM4BQ9BQ04 359 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 RBM4Q9BWF3 364 aaKnown RBP6.1□□□□□ -1.43
HERC4-209ENST00000473533 BRINP2Q9C0B6 783 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms