RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 HOPXQ9BPY8 73 aaPredicted RBP21.08■□□□□ 0.96
COL18A1-207ENST00000473212 ERVK-6Q9BXR3 956 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 MID1IP1Q9NPA3 183 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 AGPAT4Q9NRZ5 378 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 CMTM6Q9NX76 183 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 FAF1Q9UNN5 650 aaPredicted RBP21.08■□□□□ 0.96
COL18A1-207ENST00000473212 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 MYO16Q9Y6X6 1858 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 UBXN8O00124 270 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 ANGPT2O15123 496 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 WISP3O95389 354 aaPredicted RBP21.07■□□□□ 0.96
COL18A1-207ENST00000473212 CLIC3O95833 236 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 IL10P22301 178 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 MYF6P23409 242 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 APLP1P51693 650 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 MLLT6P55198 1093 aaPredicted RBP21.07■□□□□ 0.96
COL18A1-207ENST00000473212 ECT2LQ008S8 904 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 INPP5AQ14642 412 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 DDIASQ8IXT1 998 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 CMTR2Q8IYT2 770 aaKnown RBP21.07■□□□□ 0.96
COL18A1-207ENST00000473212 GABPB2Q8TAK5 448 aaPredicted RBP21.07■□□□□ 0.96
COL18A1-207ENST00000473212 DCUN1D5Q9BTE7 237 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 MUC3BQ9H195 1237 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 ARNT2Q9HBZ2 717 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 ATP13A1Q9HD20 1204 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 BTRCQ9Y297 605 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 NDUFAF1Q9Y375 327 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 LAMA3Q16787 3333 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 AQP12BA6NM10 295 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 H3BMM5 538 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 CDK14O94921 469 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 PSMA4P25789 261 aaKnown RBP21.07■□□□□ 0.96
COL18A1-207ENST00000473212 OR4D1Q15615 310 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 SLC39A12Q504Y0 691 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 AQP12AQ8IXF9 295 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 MIER2Q8N344 545 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 TTC9BQ8N6N2 239 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 PACRGLQ8N7B6 248 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 PTGR2Q8N8N7 351 aaPredicted RBP21.07■□□□□ 0.96
COL18A1-207ENST00000473212 TWIST2Q8WVJ9 160 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 TRIM15Q9C019 465 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 RGS18Q9NS28 235 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 CDC14AQ9UNH5 594 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 GIT1Q9Y2X7 761 aa21.07■□□□□ 0.96
COL18A1-207ENST00000473212 FXYD1O00168 92 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 SOAT2O75908 522 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 HMBSP08397 361 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 FASP25445 335 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 GRK4P32298 578 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 RPL9P32969 192 aaKnown RBP21.06■□□□□ 0.96
COL18A1-207ENST00000473212 ENTPD1P49961 510 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 ZBED5Q49AG3 693 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 GNASQ5JWF2 1037 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 TAF2Q6P1X5 1199 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 SPATA2LQ8IUW3 424 aaPredicted RBP21.06■□□□□ 0.96
COL18A1-207ENST00000473212 OR13C4Q8NGS5 318 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 CYGBQ8WWM9 190 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 IGSF8Q969P0 613 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 GFM2Q969S9 779 aaKnown RBP21.06■□□□□ 0.96
COL18A1-207ENST00000473212 C12orf43Q96C57 262 aaKnown RBP21.06■□□□□ 0.96
COL18A1-207ENST00000473212 VPS45Q9NRW7 570 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 TUBA8Q9NY65 449 aaPredicted RBP21.06■□□□□ 0.96
COL18A1-207ENST00000473212 PADI3Q9ULW8 664 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 OAZ3Q9UMX2 235 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 DOCK4Q8N1I0 1966 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 MUSKO15146 869 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 NUP107P57740 925 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 GALNT3Q14435 633 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 DUS1LQ6P1R4 473 aaKnown RBP21.06■□□□□ 0.96
COL18A1-207ENST00000473212 GPR180Q86V85 440 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 SMIM14Q96QK8 99 aa21.06■□□□□ 0.96
COL18A1-207ENST00000473212 TDRD15B5MCY1 1934 aaKnown RBP21.05■□□□□ 0.96
COL18A1-207ENST00000473212 LDB2O43679 373 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 SLC6A2P23975 617 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 PFKFB4Q16877 469 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 MARC1Q5VT66 337 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 PRMT9Q6P2P2 845 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 DHRS4L2Q6PKH6 230 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 MINDY1Q8N5J2 469 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 TNIP2Q8NFZ5 429 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 BLOC1S5Q8TDH9 187 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 FBXL20Q96IG2 436 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 OSBPL6Q9BZF3 934 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 TUBB1Q9H4B7 451 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 IKZF3Q9UKT9 509 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 TRIM64CA6NLI5 447 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 TMX2-CTNND1H3BSU7 103 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 ARPC2O15144 300 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 ATXN1LP0C7T5 689 aaKnown RBP21.05■□□□□ 0.96
COL18A1-207ENST00000473212 HSD17B1P14061 328 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 CD1DP15813 335 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 CES1P23141 567 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 SLC36A3Q495N2 470 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 SPRYD7Q5W111 196 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 LCN8Q6JVE9 175 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 PHYKPLQ8IUZ5 450 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 ADGRG5Q8IZF4 528 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 KLHDC9Q8NEP7 349 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 FNDC8Q8TC99 324 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 SNRNP27Q8WVK2 155 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms