RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 OR1A2Q9Y585 309 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 PCDHGB2Q9Y5G2 931 aa20.72■□□□□ 0.91
TOP3A-204ENST00000472959 DOCK9Q9BZ29 2069 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 C2orf81A6NN90 581 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 K7ESM1 405 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 ECEL1O95672 775 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 CRTAMO95727 393 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 SLC4A1P02730 911 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 KELP23276 732 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 GPR1P46091 355 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 CCT8P50990 548 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 KIAA1024LP59773 190 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 BASP1P80723 227 aaKnown RBP20.71■□□□□ 0.91
TOP3A-204ENST00000472959 CDK16Q00536 496 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 MSLNQ13421 630 aaPredicted RBP20.71■□□□□ 0.91
TOP3A-204ENST00000472959 NFATC4Q14934 902 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 RAET1GQ6H3X3 334 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 ADAMTSL4Q6UY14 1074 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 KDM7AQ6ZMT4 941 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 C19orf43Q9BQ61 176 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 TEX101Q9BY14 249 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 DDX47Q9H0S4 455 aaKnown RBP20.71■□□□□ 0.91
TOP3A-204ENST00000472959 PHPT1Q9NRX4 125 aaPredicted RBP20.71■□□□□ 0.91
TOP3A-204ENST00000472959 TM7SF3Q9NS93 570 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.71■□□□□ 0.91
TOP3A-204ENST00000472959 IL17CQ9P0M4 197 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 CDV3Q9UKY7 258 aaKnown RBP20.71■□□□□ 0.91
TOP3A-204ENST00000472959 PKP3Q9Y446 797 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 KNL1Q8NG31 2342 aa20.71■□□□□ 0.91
TOP3A-204ENST00000472959 PCDHGA12O60330 932 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 MYCLP1P12525 358 aaPredicted RBP20.7■□□□□ 0.9
TOP3A-204ENST00000472959 BPIP17213 487 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 LPOP22079 712 aaPredicted RBP20.7■□□□□ 0.9
TOP3A-204ENST00000472959 CDH17Q12864 832 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 GPS1Q13098 491 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 SUZ12Q15022 739 aaKnown RBP20.7■□□□□ 0.9
TOP3A-204ENST00000472959 TRIP13Q15645 432 aaPredicted RBP20.7■□□□□ 0.9
TOP3A-204ENST00000472959 PRAMEF14Q5SWL7 426 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 TPRG1LQ5T0D9 272 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 HENMT1Q5T8I9 393 aaKnown RBP20.7■□□□□ 0.9
TOP3A-204ENST00000472959 PPP1R21Q6ZMI0 780 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 PELI3Q8N2H9 469 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 DTX3LQ8TDB6 740 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 FUBP1Q96AE4 644 aaKnown RBP20.7■□□□□ 0.9
TOP3A-204ENST00000472959 PLEKHG4BQ96PX9 1271 aa20.7■□□□□ 0.9
TOP3A-204ENST00000472959 AP3B1O00203 1094 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 SLC30A4O14863 429 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 STX7O15400 261 aaKnown RBP20.69■□□□□ 0.9
TOP3A-204ENST00000472959 CDK3Q00526 305 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 PPP1R7Q15435 360 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 UAP1L1Q3KQV9 507 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 PDPK2PQ6A1A2 396 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 SYDE1Q6ZW31 735 aaPredicted RBP20.69■□□□□ 0.9
TOP3A-204ENST00000472959 HEATR4Q86WZ0 1026 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 DNAAF3Q8N9W5 541 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 GPR26Q8NDV2 337 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 WDR92Q96MX6 357 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 ZSCAN5AQ9BUG6 496 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 CASS4Q9NQ75 786 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 DNAJC28Q9NX36 388 aa20.69■□□□□ 0.9
TOP3A-204ENST00000472959 H3BM21 787 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 TNFRSF10CO14798 259 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 SOD1P00441 154 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 CSF2P04141 144 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 NME1P15531 152 aaKnown RBP20.68■□□□□ 0.9
TOP3A-204ENST00000472959 TPSB2P20231 275 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 MAGEA6P43360 314 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 VPS41P49754 854 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 HNRNPKP61978 463 aaKnown RBP eCLIP20.68■□□□□ 0.9
TOP3A-204ENST00000472959 EIF2B5Q13144 721 aaKnown RBP20.68■□□□□ 0.9
TOP3A-204ENST00000472959 SHBQ15464 509 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 TPSAB1Q15661 275 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 KLHL7Q8IXQ5 586 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 TRAM1L1Q8N609 369 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 OR52K1Q8NGK4 314 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 HIC2Q96JB3 615 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 AGAP2Q99490 1192 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 LGR4Q9BXB1 951 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 SPATA16Q9BXB7 569 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 BPIFA1Q9NP55 256 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 ARL5AQ9Y689 179 aa20.68■□□□□ 0.9
TOP3A-204ENST00000472959 LRRK1Q38SD2 2015 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 TPH1P17752 444 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 EPHA8P29322 1005 aaPredicted RBP20.67■□□□□ 0.9
TOP3A-204ENST00000472959 PTGIRP43119 386 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 BLKP51451 505 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 SARNPP82979 210 aaKnown RBP20.67■□□□□ 0.9
TOP3A-204ENST00000472959 PPARDQ03181 441 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 LAMB3Q13751 1172 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 RSPO4Q2I0M5 234 aaPredicted RBP20.67■□□□□ 0.9
TOP3A-204ENST00000472959 ALS2CLQ60I27 953 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 ENPP7Q6UWV6 458 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 DBX2Q6ZNG2 339 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 OR56A4Q8NGH8 313 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 SAP25Q8TEE9 199 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 BTN2A2Q8WVV5 523 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 IL26Q9NPH9 171 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 KLQ9UEF7 1012 aa20.67■□□□□ 0.9
TOP3A-204ENST00000472959 LDB2O43679 373 aa20.66■□□□□ 0.9
TOP3A-204ENST00000472959 CD59P13987 128 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms