RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PSMA7O14818 248 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 MDM4O15151 490 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 PMM2O15305 246 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 P4HA2O15460 535 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 MED7O43513 233 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 LATO43561 262 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ACSL4O60488 711 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TBL1XO60907 577 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TCEA3O75764 348 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 BEST1O76090 585 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 SMC2O95347 1197 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 GNA14O95837 355 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 IGLV3-27P01718 113 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 KLKB1P03952 638 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 HMBSP08397 361 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TRIM49P0CI25 452 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TRIM49CP0CI26 452 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ACP1P24666 158 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 APEX1P27695 318 aaKnown RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 ACSL1P33121 698 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 EIF2S3P41091 472 aaKnown RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 SYKP43405 635 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 RXRGP48443 463 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ACADVLP49748 655 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ADPRHP54922 357 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TBX4P57082 545 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 NXPH1P58417 271 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 DAOAP59103 153 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ERVPABLB-1P60509 514 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 PHC1P78364 1004 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 FKBP3Q00688 224 aaKnown RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 ECT2LQ008S8 904 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 GCNT1Q02742 428 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 STK4Q13043 487 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 KLF10Q13118 480 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 EIF3IQ13347 325 aaKnown RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 CUL2Q13617 745 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 STAT4Q14765 748 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TERF2Q15554 542 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TBC1D25Q3MII6 688 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TAF1BQ53T94 588 aaPredicted RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 CCDC157Q569K6 752 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 DCAF17Q5H9S7 520 aaPredicted RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 HES3Q5TGS1 186 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 SFMBT2Q5VUG0 894 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 BSPRYQ5W0U4 402 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 SPOPLQ6IQ16 392 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 NEK5Q6P3R8 708 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 FAM173BQ6P4H8 233 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 NCEH1Q6PIU2 408 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 LCLAT1Q6UWP7 414 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ENOSF1Q7L5Y1 443 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 SCD5Q86SK9 330 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ADIPOR2Q86V24 386 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TAX1BP1Q86VP1 789 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TRIM69Q86WT6 500 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 OR5AN1Q8NGI8 311 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 FIBINQ8TAL6 211 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 SAP25Q8TEE9 199 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 OR8D1Q8WZ84 308 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ERCC4Q92889 916 aaPredicted RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 TTC17Q96AE7 1141 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ARHGEF26Q96DR7 871 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 PAGE5Q96GU1 130 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 BTN2A3PQ96KV6 586 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 MED15Q96RN5 788 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 TWNKQ96RR1 684 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ADOQ96SZ5 270 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 DPYSL5Q9BPU6 564 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 DPH1Q9BZG8 443 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ULBP1Q9BZM6 244 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ABCG4Q9H172 646 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 SDCBP2Q9H190 292 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 BLZF1Q9H2G9 400 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 IL21RQ9HBE5 538 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 PRSS16Q9NQE7 514 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.59□□□□□ -1.83
XRN1-209ENST00000472625 RRN3Q9NYV6 651 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ARMCX3Q9UH62 379 aaPredicted RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 OAZ3Q9UMX2 235 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ERVW-1Q9UQF0 538 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 HS3ST3A1Q9Y663 406 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 PTPRDP23468 1912 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 EML5Q05BV3 1969 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ZNF638Q14966 1978 aaKnown RBP3.59□□□□□ -1.83
XRN1-209ENST00000472625 THADAQ6YHU6 1953 aa3.59□□□□□ -1.83
XRN1-209ENST00000472625 ACACAQ13085 2346 aa3.59□□□□□ -1.84
XRN1-209ENST00000472625 IGSF10Q6WRI0 2623 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 GCN1Q92616 2671 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 COL5A1P20908 1838 aaPredicted RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 MYO16Q9Y6X6 1858 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 ASCC3Q8N3C0 2202 aaKnown RBP3.58□□□□□ -1.84
XRN1-209ENST00000472625 APC2O95996 2303 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3DA0A087WVF3 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3IA0A087WXS9 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3EA0A087X179 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 TBC1D3KA0A087X1G2 549 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 A0A0A6YYJ9 748 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 BICDL2A1A5D9 508 aa3.58□□□□□ -1.84
XRN1-209ENST00000472625 GOLGA6L4A6NEF3 574 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms