RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PARP15Q460N3 678 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 DCAF12Q5T6F0 453 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 ATP1A1-AS1Q5TC04 95 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 ANKS6Q68DC2 871 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 SCYL2Q6P3W7 929 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 ASB18Q6ZVZ8 466 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 DPPA4Q7L190 304 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 MAMDC2Q7Z304 686 aaPredicted RBP9.31□□□□□ -0.92
VCL-204ENST00000472585 KDELC2Q7Z4H8 507 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 ZNF761Q86XN6 746 aaPredicted RBP9.31□□□□□ -0.92
VCL-204ENST00000472585 SRRM1Q8IYB3 904 aaKnown RBP9.31□□□□□ -0.92
VCL-204ENST00000472585 AGBL5Q8NDL9 886 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 RNF31Q96EP0 1072 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 SMIM14Q96QK8 99 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 TUBGCP5Q96RT8 1024 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 CTRCQ99895 268 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 NCAPGQ9BPX3 1015 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 DDA1Q9BW61 102 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 FRMD8Q9BZ67 464 aaPredicted RBP9.31□□□□□ -0.92
VCL-204ENST00000472585 SLC39A1Q9NY26 324 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 PDP2Q9P2J9 529 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 B4GALT6Q9UBX8 382 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 SUFUQ9UMX1 484 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 ANKRD36A6QL64 1941 aa9.31□□□□□ -0.92
VCL-204ENST00000472585 TRBV23OR9-2A0A075B6M9 112 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 SEMA7AO75326 666 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 SOD1P00441 154 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 ELFN1P0C7U0 828 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 MYCLP1P12525 358 aaPredicted RBP9.3□□□□□ -0.92
VCL-204ENST00000472585 POU3F2P20265 443 aaPredicted RBP9.3□□□□□ -0.92
VCL-204ENST00000472585 NR1D1P20393 614 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 F8A1P23610 371 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 COL8A1P27658 744 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 OAS2P29728 719 aaKnown RBP9.3□□□□□ -0.92
VCL-204ENST00000472585 ADCY8P40145 1251 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 ETV3P41162 512 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 GNPDA1P46926 289 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 GSCP56915 257 aaPredicted RBP9.3□□□□□ -0.92
VCL-204ENST00000472585 RAB15P59190 212 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 TRA2AQ13595 282 aaKnown RBP eCLIP9.3□□□□□ -0.92
VCL-204ENST00000472585 ACOX1Q15067 660 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 CNGA3Q16281 694 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 CLPPQ16740 277 aaPredicted RBP9.3□□□□□ -0.92
VCL-204ENST00000472585 TCTN3Q6NUS6 607 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 SLC30A9Q6PML9 568 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 ARHGAP22Q7Z5H3 698 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 HSD11B1LQ7Z5J1 315 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 FAM129CQ86XR2 697 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 ZNF677Q86XU0 584 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 TICAM1Q8IUC6 712 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 NLGN4XQ8N0W4 816 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 PGBD5Q8N414 524 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 NPWQ8N729 165 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 NLGN4YQ8NFZ3 816 aaPredicted RBP9.3□□□□□ -0.92
VCL-204ENST00000472585 OR4D9Q8NGE8 314 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 KIAA1524Q8TCG1 905 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 CPT1CQ8TCG5 803 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 PRR14Q9BWN1 585 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 ZMYND15Q9H091 742 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 WDR26Q9H7D7 661 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 APMAPQ9HDC9 416 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 CASS4Q9NQ75 786 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 TMEM98Q9Y2Y6 226 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 KCTD3Q9Y597 815 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 PCDHB3Q9Y5E6 796 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 PCDHGC4Q9Y5F7 938 aa9.3□□□□□ -0.92
VCL-204ENST00000472585 B4E171 279 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 PALMO75781 387 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 PEX11BO96011 259 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 LHCGRP22888 699 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 MAN1A1P33908 653 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 SOX5P35711 763 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 TSPAN7P41732 249 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 GPR3P46089 330 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 PPM1FP49593 454 aaPredicted RBP9.29□□□□□ -0.92
VCL-204ENST00000472585 SCNN1BP51168 640 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 ZNF143P52747 638 aaPredicted RBP9.29□□□□□ -0.92
VCL-204ENST00000472585 NDST2P52849 883 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 CDK3Q00526 305 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 NSUN2Q08J23 767 aaKnown RBP eCLIP9.29□□□□□ -0.92
VCL-204ENST00000472585 SLC10A7Q0GE19 358 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 IHHQ14623 411 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 GRM3Q14832 879 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 CLEC16AQ2KHT3 1053 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 DPCR1Q3MIW9 517 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 TMEM71Q6P5X7 295 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 Q6ZVL8 140 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 CYP4V2Q6ZWL3 525 aaPredicted RBP9.29□□□□□ -0.92
VCL-204ENST00000472585 MON1BQ7L1V2 547 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 TSPAN33Q86UF1 283 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 PHF13Q86YI8 300 aaPredicted RBP9.29□□□□□ -0.92
VCL-204ENST00000472585 MLKLQ8NB16 471 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 MSANTD4Q8NCY6 345 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 C3orf20Q8ND61 904 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 FNIP1Q8TF40 1166 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 STARD8Q92502 1023 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 RTP4Q96DX8 246 aa9.29□□□□□ -0.92
VCL-204ENST00000472585 MOCOSQ96EN8 888 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms