RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ZFR2Q9UPR6 939 aaKnown RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.81■□□□□ 0.28
CCM2-205ENST00000472223 TEX264Q9Y6I9 313 aa16.81■□□□□ 0.28
CCM2-205ENST00000472223 A0A0U1RQS6 177 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 ERLIN1O75477 346 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 SPAG6O75602 509 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 BPIP17213 487 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 ITGALP20701 1170 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 CD27P26842 260 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 DPP6P42658 865 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 GPR1P46091 355 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 DHPSP49366 369 aaPredicted RBP16.8■□□□□ 0.28
CCM2-205ENST00000472223 DCDC1P59894 354 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 PPP2CBP62714 309 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 PPP2CAP67775 309 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 CREB5Q02930 508 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 CBLBQ13191 982 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 THOC5Q13769 683 aaKnown RBP16.8■□□□□ 0.28
CCM2-205ENST00000472223 NUMA1Q14980 2115 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 LONRF1Q17RB8 773 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 ANKRD20A4Q4UJ75 823 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 MSS51Q4VC12 460 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 RAET1GQ6H3X3 334 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 TECPR1Q7Z6L1 1165 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 TMEM135Q86UB9 458 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 OTUD6BQ8N6M0 293 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCM2-205ENST00000472223 OR13C4Q8NGS5 318 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 FAM174AQ8TBP5 190 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 NELL1Q92832 810 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 SKA1Q96BD8 255 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 CDKN2AIPNLQ96HQ2 116 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 DNAJC1Q96KC8 554 aaKnown RBP16.8■□□□□ 0.28
CCM2-205ENST00000472223 HSPA12BQ96MM6 686 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 ABCG8Q9H221 673 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 PPANQ9NQ55 473 aaKnown RBP16.8■□□□□ 0.28
CCM2-205ENST00000472223 KCTD3Q9Y597 815 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 CEP192Q8TEP8 1941 aa16.8■□□□□ 0.28
CCM2-205ENST00000472223 EML5Q05BV3 1969 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 A0A1W2PPC4 97 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 LATO43561 262 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 BANF1O75531 89 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 GNSP15586 552 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 TSHRP16473 764 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 BCKDHBP21953 392 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 NMBRP28336 390 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 MC4RP32245 332 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 VSNL1P62760 191 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 DPTQ07507 201 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 FASTKD1Q53R41 847 aaKnown RBP16.79■□□□□ 0.28
CCM2-205ENST00000472223 ZRANB3Q5FWF4 1079 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 LYSMD4Q5XG99 296 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 PDPK2PQ6A1A2 396 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 ESRP1Q6NXG1 681 aaKnown RBP16.79■□□□□ 0.28
CCM2-205ENST00000472223 AFTPHQ6ULP2 937 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 FAM151BQ6UXP7 276 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 PRR23BQ6ZRT6 265 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 SDCCAG8Q86SQ7 713 aaPredicted RBP16.79■□□□□ 0.28
CCM2-205ENST00000472223 TRAM1L1Q8N609 369 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 ZBTB44Q8NCP5 570 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 MYRIPQ8NFW9 859 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 ZNF398Q8TD17 642 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 CALML6Q8TD86 181 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 DTX3LQ8TDB6 740 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 HDAC10Q969S8 669 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 EID2BQ96D98 161 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 MFSD3Q96ES6 412 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 SERAC1Q96JX3 654 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 TBATAQ96M53 351 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 RIOK2Q9BVS4 552 aaKnown RBP16.79■□□□□ 0.28
CCM2-205ENST00000472223 MIR1-1HGQ9H1L0 117 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 ASB8Q9H765 288 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 VPS37BQ9H9H4 285 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 AASDHPPTQ9NRN7 309 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 NFKBIL1Q9UBC1 381 aaPredicted RBP16.79■□□□□ 0.28
CCM2-205ENST00000472223 FKBPLQ9UIM3 349 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 HS3ST3A1Q9Y663 406 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 FAM169AQ9Y6X4 670 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 LRRK1Q38SD2 2015 aa16.79■□□□□ 0.28
CCM2-205ENST00000472223 THADAQ6YHU6 1953 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 H7C0S8 307 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 TOR1BO14657 336 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 HRO43593 1189 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 SRP72O76094 671 aaKnown RBP16.78■□□□□ 0.28
CCM2-205ENST00000472223 VAPBO95292 243 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 PRAMEF1O95521 474 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 PCCBP05166 539 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 IGHV4-34P06331 123 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 CACNG1Q06432 222 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 PTPRCAPQ14761 206 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 GPR33Q49SQ1 333 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 AARS2Q5JTZ9 985 aaKnown RBP16.78■□□□□ 0.28
CCM2-205ENST00000472223 LYPLAL1Q5VWZ2 237 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 KIAA0930Q6ICG6 404 aaPredicted RBP16.78■□□□□ 0.28
CCM2-205ENST00000472223 MRNIPQ6NTE8 343 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 EMBQ6PCB8 327 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 CES3Q6UWW8 571 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 C3orf62Q6ZUJ4 267 aa16.78■□□□□ 0.28
CCM2-205ENST00000472223 TRMT10CQ7L0Y3 403 aaKnown RBP16.78■□□□□ 0.28
CCM2-205ENST00000472223 TAS2R42Q7RTR8 314 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms