RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ERP44Q9BS26 406 aa8.57□□□□□ -1.04
CD47-204ENST00000471694 IRF2BPLQ9H1B7 796 aa8.57□□□□□ -1.04
CD47-204ENST00000471694 OR2AG1Q9H205 316 aa8.57□□□□□ -1.04
CD47-204ENST00000471694 TDP1Q9NUW8 608 aa8.57□□□□□ -1.04
CD47-204ENST00000471694 ENOPH1Q9UHY7 261 aa8.57□□□□□ -1.04
CD47-204ENST00000471694 CORO2BQ9UQ03 480 aa8.57□□□□□ -1.04
CD47-204ENST00000471694 CICQ96RK0 1608 aaPredicted RBP8.57□□□□□ -1.04
CD47-204ENST00000471694 A0A1B0GTH6 734 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 MUSKO15146 869 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 LRATO95237 230 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 TSPAN19P0C672 248 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 CYP4F3Q08477 520 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 LAPTM5Q13571 262 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 GFOD2Q3B7J2 385 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SLC44A4Q53GD3 710 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 PMF1Q6P1K2 205 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ATG14Q6ZNE5 492 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 RTL4Q6ZR62 310 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 OR2AJ1Q8NGZ0 328 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 FAM3CQ92520 227 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ZNF607Q96SK3 696 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 PAFAH2Q99487 392 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ACBD6Q9BR61 282 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SEMA6BQ9H3T3 888 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 LINC00854A0A1B0GVQ3 168 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ZNF726A6NNF4 738 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 FZD9O00144 591 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 VEGFDO43915 354 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 B4GALT4O60513 344 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 GOT1P17174 413 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 OTX2P32243 289 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 DLG4P78352 724 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 IL5RAQ01344 420 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 GCNT1Q02742 428 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 RBPJQ06330 500 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 NDUFAF6Q330K2 333 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 AMZ2Q86W34 360 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ZBTB2Q8N680 514 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 TRPV3Q8NET8 790 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ASB2Q96Q27 587 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 TPSD1Q9BZJ3 242 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 TMEM27Q9HBJ8 222 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SLC35C2Q9NQQ7 365 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.56□□□□□ -1.04
CD47-204ENST00000471694 KIF20BQ96Q89 1820 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 PRR5-ARHGAP8B1AHC4 643 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 KHNYNO15037 678 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 LTA4HP09960 611 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 HYAL2Q12891 473 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 DEF8Q6ZN54 512 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 FRS2Q8WU20 508 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 KLC4Q9NSK0 619 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 STMN3Q9NZ72 180 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.56□□□□□ -1.04
CD47-204ENST00000471694 SOWAHBA6NEL2 793 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 PSMD10O75832 226 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SNUPNO95149 360 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 CPNE6O95741 557 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 CALCAP01258 141 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 CCDC166P0CW27 439 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 HCAR3P49019 387 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 INAQ16352 499 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SLC26A11Q86WA9 606 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 TESCQ96BS2 214 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 PLEKHA1Q9HB21 404 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 RIMKLBQ9ULI2 386 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ARL2BPQ9Y2Y0 163 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 A6NL46 340 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ANPEPP15144 967 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 GATMP50440 423 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 RAD23BP54727 409 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SEC23AQ15436 765 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 N4BP2L1Q5TBK1 243 aaPredicted RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 PAOXQ6QHF9 649 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 EIF3MQ7L2H7 374 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 OAFQ86UD1 273 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 TMEM145Q8NBT3 493 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 RDH11Q8TC12 318 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ABHD5Q8WTS1 349 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 NDRG1Q92597 394 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 PDZD7Q9H5P4 517 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 AGO3Q9H9G7 860 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 SDHAF3Q9NRP4 125 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SAC3D1A6NKF1 404 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 AXIN1O15169 862 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 TYRP1P17643 537 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 CBX5P45973 191 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 OVGP1Q12889 678 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 NLRP14Q86W24 1093 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 PROSER1Q86XN7 944 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 ZNF366Q8N895 744 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 FOXJ1Q92949 421 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SLC22A18Q96BI1 424 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 SNRNP25Q9BV90 132 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 RAB11FIP5Q9BXF6 653 aa8.56□□□□□ -1.04
CD47-204ENST00000471694 MRPS26Q9BYN8 205 aaKnown RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 ROPN1BQ9BZX4 212 aaPredicted RBP8.56□□□□□ -1.04
CD47-204ENST00000471694 RIBC2Q9H4K1 309 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms