RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 BRWD1-AS2P59051 145 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 OLR1P78380 273 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 TROAPQ12815 778 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 ZBTB17Q13105 803 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 OLIG2Q13516 323 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 DCTN2Q13561 401 aaKnown RBP3.91□□□□□ -1.78
BRCA2-202ENST00000470094 CCNG2Q16589 344 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 DPCR1Q3MIW9 517 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 SIGIRRQ6IA17 410 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 FAM180BQ6P0A1 224 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 CUZD1Q86UP6 607 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 DIS3L2Q8IYB7 885 aaKnown RBP3.91□□□□□ -1.78
BRCA2-202ENST00000470094 CCDC13Q8IYE1 715 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 FAM149B1Q96BN6 582 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 INTS12Q96CB8 462 aaKnown RBP3.91□□□□□ -1.78
BRCA2-202ENST00000470094 HARBI1Q96MB7 349 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 TMEM68Q96MH6 324 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 PKP4Q99569 1192 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 C1QTNF5Q9BXJ0 243 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 UBTD1Q9HAC8 227 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 MMP25Q9NPA2 562 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 IRAK4Q9NWZ3 460 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 AMDHD2Q9Y303 409 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 A0A1W2PRG0 241 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 CD4P01730 458 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 IL7RP16871 459 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 AMD1P17707 334 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 DGKAP23743 735 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 MCM3P25205 808 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 ICAM3P32942 547 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 IL15P40933 162 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-202ENST00000470094 RGS19P49795 217 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 DLX5P56178 289 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 CSNK2A1P68400 391 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-202ENST00000470094 FOXM1Q08050 763 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 GOLGA8DPQ0D2H9 430 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 FRG1Q14331 258 aaKnown RBP3.9□□□□□ -1.79
BRCA2-202ENST00000470094 ZRSR1Q15695 479 aaKnown RBP3.9□□□□□ -1.79
BRCA2-202ENST00000470094 KCNT1Q5JUK3 1230 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 C9orf50Q5SZB4 431 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 CACNA2D4Q7Z3S7 1137 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 CSNK2A3Q8NEV1 391 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 OR2AK2Q8NG84 335 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 ETNPPLQ8TBG4 499 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 RFFLQ8WZ73 363 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 CD101Q93033 1021 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 FEM1CQ96JP0 617 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 CMKLR1Q99788 373 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 PCGF1Q9BSM1 259 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 STRA6Q9BX79 667 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 SPRY4Q9C004 299 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 TMX4Q9H1E5 349 aaPredicted RBP3.9□□□□□ -1.79
BRCA2-202ENST00000470094 SLC28A3Q9HAS3 691 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 DONSONQ9NYP3 566 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 DLGAP2Q9P1A6 1054 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 ABI3Q9P2A4 366 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 LOXL2Q9Y4K0 774 aa3.9□□□□□ -1.79
BRCA2-202ENST00000470094 TCF20Q9UGU0 1960 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 FAM237AA0A1B0GTK4 181 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 ZNF587BE7ETH6 402 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 TGFB1I1O43294 461 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 PAGE4O60829 102 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 BAIAP3O94812 1187 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 DDNO94850 711 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 CAMTA2O94983 1202 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 NKX2-2O95096 273 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 EGFP01133 1207 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 HSPA1AP0DMV8 641 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 HSPA1BP0DMV9 641 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 CAPN3P20807 821 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 S1PR1P21453 382 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 BSGP35613 385 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 GNL1P36915 607 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 USP8P40818 1118 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 F2RL1P55085 397 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 PDE1BQ01064 536 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 RELQ04864 619 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 SLC20A2Q08357 652 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 ACSM2AQ08AH3 577 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 TMEM115Q12893 351 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 ILF3Q12906 894 aaKnown RBP eCLIP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 TBCEQ15813 527 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 TSTQ16762 297 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 CXorf66Q5JRM2 361 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 IRAK1BP1Q5VVH5 260 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 FRG2Q64ET8 278 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 FAAH2Q6GMR7 532 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 DUS1LQ6P1R4 473 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 C9orf139Q6ZV77 190 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 DPPA4Q7L190 304 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 SATL1Q86VE3 508 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 ODF3L1Q8IXM7 274 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 PCDH20Q8N6Y1 951 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 MAB21L3Q8N8X9 362 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 LNX1Q8TBB1 728 aaPredicted RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 DUSP19Q8WTR2 217 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 DNASE2BQ8WZ79 361 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 ORAI1Q96D31 301 aa3.89□□□□□ -1.79
BRCA2-202ENST00000470094 RRNAD1Q96FB5 475 aaKnown RBP3.89□□□□□ -1.79
BRCA2-202ENST00000470094 CDCA5Q96FF9 252 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms