RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 GCNT7Q6ZNI0 430 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 TP53INP2Q8IXH6 220 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 OR13H1Q8NG92 308 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 ADAMTS14Q8WXS8 1223 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 GATA6Q92908 595 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 CCT8L2Q96SF2 557 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 TMEM121BQ9BXQ6 578 aaPredicted RBP17.69■□□□□ 0.42
MRPL28-208ENST00000469744 FAM107BQ9H098 131 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 PDFQ9HBH1 243 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 FTSJ1Q9UET6 329 aa17.69■□□□□ 0.42
MRPL28-208ENST00000469744 ANKRD36A6QL64 1941 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 IGLON5A6NGN9 336 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 HACD1B0YJ81 288 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 DFFAO00273 331 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 NEMP1O14524 444 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 RAD51BO15315 384 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 PRAMEF11O60813 436 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 PIGNO95427 931 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 PAK4O96013 591 aaPredicted RBP17.68■□□□□ 0.42
MRPL28-208ENST00000469744 NDST2P52849 883 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 RPS21P63220 83 aaKnown RBP17.68■□□□□ 0.42
MRPL28-208ENST00000469744 OVGP1Q12889 678 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 PDIA2Q13087 525 aaKnown RBP17.68■□□□□ 0.42
MRPL28-208ENST00000469744 SKIDA1Q1XH10 827 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 INAVAQ3KP66 663 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 KIAA1161Q6NSJ0 714 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 ARHGAP36Q6ZRI8 547 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 ARHGAP12Q8IWW6 846 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 EID2Q8N6I1 236 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 ZNF473Q8WTR7 871 aaKnown RBP17.68■□□□□ 0.42
MRPL28-208ENST00000469744 LRIG1Q96JA1 1093 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 FEM1CQ96JP0 617 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 OSBPL1AQ9BXW6 950 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 SLC17A9Q9BYT1 436 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 ERVMER34-1Q9H9K5 563 aa17.68■□□□□ 0.42
MRPL28-208ENST00000469744 PLXNB3Q9ULL4 1909 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 GOLGA4Q13439 2230 aaKnown RBP17.67■□□□□ 0.42
MRPL28-208ENST00000469744 FREM2Q5SZK8 3169 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 COL5A1P20908 1838 aaPredicted RBP17.67■□□□□ 0.42
MRPL28-208ENST00000469744 C5orf60A6NFR6 353 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 ARHGAP42A6NI28 874 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 AP1G1O43747 822 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 CHN1P15882 459 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 DPYSQ14117 519 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 KCNJ11Q14654 390 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 PTAR1Q7Z6K3 402 aaPredicted RBP17.67■□□□□ 0.42
MRPL28-208ENST00000469744 ZC3H18Q86VM9 953 aaKnown RBP17.67■□□□□ 0.42
MRPL28-208ENST00000469744 MARCH9Q86YJ5 346 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 PDIK1LQ8N165 341 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 SLC22A18ASQ8N1D0 253 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 CSPG4P5Q96PW8 444 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 SELENOSQ9BQE4 189 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 SENP1Q9P0U3 644 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 MSRB2Q9Y3D2 182 aa17.67■□□□□ 0.42
MRPL28-208ENST00000469744 LRRK1Q38SD2 2015 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 POM121BA6NF01 834 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 H3BRJ5 948 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 YKT6O15498 198 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 TNFSF14O43557 240 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 MAGEC1O60732 1142 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 GCATO75600 419 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 PROS1P07225 676 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 ARL4AP40617 200 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 RGRP47804 291 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 RXRGP48443 463 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 CCT5P48643 541 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 ZNF135P52742 658 aaPredicted RBP17.66■□□□□ 0.42
MRPL28-208ENST00000469744 RAD51Q06609 339 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 ANKRD22Q5VYY1 191 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 AFMIDQ63HM1 303 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 FOXR1Q6PIV2 292 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 MICALCLQ6ZW33 695 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 TTC7BQ86TV6 843 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 ZBED8Q8IZ13 594 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 OXR1Q8N573 874 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 PYROXD1Q8WU10 500 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 MAML1Q92585 1016 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 PPANQ9NQ55 473 aaKnown RBP17.66■□□□□ 0.42
MRPL28-208ENST00000469744 INTS9Q9NV88 658 aaKnown RBP17.66■□□□□ 0.42
MRPL28-208ENST00000469744 ETNK2Q9NVF9 386 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 DONSONQ9NYP3 566 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 RSPH14Q9UHP6 348 aa17.66■□□□□ 0.42
MRPL28-208ENST00000469744 DMXL2Q8TDJ6 3036 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 EXOC1LA0A1B0GW35 172 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 TSPAN6O43657 245 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 SPAG6O75602 509 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 KRT37O76014 449 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 AMPD1P23109 780 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 SLC18A1P54219 525 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 DNAJC3Q13217 504 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 ZNF542PQ5EBM4 170 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 Q6ZSR6 202 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 KANSL1Q7Z3B3 1105 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 ABI3BPQ7Z7G0 1075 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 MCUQ8NE86 351 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 RAB7BQ96AH8 199 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 CNDP2Q96KP4 475 aaKnown RBP17.65■□□□□ 0.42
MRPL28-208ENST00000469744 BMFQ96LC9 184 aa17.65■□□□□ 0.42
MRPL28-208ENST00000469744 QKIQ96PU8 341 aaKnown RBP eCLIP17.65■□□□□ 0.42
MRPL28-208ENST00000469744 C10orf88Q9H8K7 445 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms