RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 C1orf232A0A0U1RR37 186 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 RCCD1A6NED2 376 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 PYGLP06737 847 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 PECAM1P16284 738 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-204ENST00000469443 SLC14A2Q15849 920 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 TEX44Q53QW1 395 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 ADAMTSL4Q6UY14 1074 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 RAD9BQ6WBX8 426 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 B4GALNT4Q76KP1 1039 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 CCDC50Q8IVM0 306 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 FAM46DQ8NEK8 389 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 GPR156Q8NFN8 814 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 OR6C4Q8NGE1 309 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 EXD1Q8NHP7 514 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 TFB1MQ8WVM0 346 aaKnown RBP18.21■□□□□ 0.51
PHGDH-204ENST00000469443 GLOD4Q9HC38 313 aa18.21■□□□□ 0.51
PHGDH-204ENST00000469443 REXO2Q9Y3B8 237 aaKnown RBP18.21■□□□□ 0.51
PHGDH-204ENST00000469443 BTNL10A8MVZ5 291 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 TCEA3O75764 348 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 FUCA1P04066 466 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 IVLP07476 585 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 PTPN3P26045 913 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 ADCY2Q08462 1091 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 GALNT3Q14435 633 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 PPP2R5EQ16537 467 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 ISXQ2M1V0 245 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 OGFOD3Q6PK18 319 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 RBM44Q6ZP01 1051 aaKnown RBP18.2■□□□□ 0.5
PHGDH-204ENST00000469443 CCL4L1Q8NHW4 92 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 CCHCR1Q8TD31 782 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 GPBAR1Q8TDU6 330 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 KRT35Q92764 455 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 P3H4Q92791 437 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 CCDC74AQ96AQ1 378 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 TADA1Q96BN2 335 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 TRIB3Q96RU7 358 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 RIOK2Q9BVS4 552 aaKnown RBP18.2■□□□□ 0.5
PHGDH-204ENST00000469443 SUDS3Q9H7L9 328 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-204ENST00000469443 TRNAU1APQ9NX07 287 aaKnown RBP18.2■□□□□ 0.5
PHGDH-204ENST00000469443 SUFUQ9UMX1 484 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 SLC17A4Q9Y2C5 497 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 GPSM3Q9Y4H4 160 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 ZFHX4Q86UP3 3567 aa18.2■□□□□ 0.5
PHGDH-204ENST00000469443 MTSS1O43312 755 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 NOBOXO60393 691 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 BRINP1O60477 761 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 USP12O75317 370 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 GNPDA1P46926 289 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 POLD2P49005 469 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 SPINT3P49223 89 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 ILF3Q12906 894 aaKnown RBP eCLIP18.19■□□□□ 0.5
PHGDH-204ENST00000469443 DOK6Q6PKX4 331 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 KIAA1524Q8TCG1 905 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 PTCD2Q8WV60 388 aaKnown RBP18.19■□□□□ 0.5
PHGDH-204ENST00000469443 GRAMD1AQ96CP6 724 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 SCARF2Q96GP6 870 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-204ENST00000469443 HIC2Q96JB3 615 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 TEKT5Q96M29 485 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 AGAP2Q99490 1192 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 GSDMCQ9BYG8 508 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 DPEP2Q9H4A9 486 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 PKD2L2Q9NZM6 624 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 RABGEF1Q9UJ41 708 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 DUSP10Q9Y6W6 482 aa18.19■□□□□ 0.5
PHGDH-204ENST00000469443 RGSL1A5PLK6 1076 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 B4DGG1 531 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 NTN3O00634 580 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-204ENST00000469443 PJA2O43164 708 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 MT-CYBP00156 380 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-204ENST00000469443 GLB1P16278 677 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 CTNNA1P35221 906 aaKnown RBP18.18■□□□□ 0.5
PHGDH-204ENST00000469443 VAV2P52735 878 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 NAP1L1P55209 391 aaKnown RBP18.18■□□□□ 0.5
PHGDH-204ENST00000469443 CDK18Q07002 472 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 WASHC5Q12768 1159 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 SPIDRQ14159 915 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 PCSK7Q16549 785 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 C14orf28Q4W4Y0 310 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 BBS12Q6ZW61 710 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 LYSMD3Q7Z3D4 306 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 KDELC2Q7Z4H8 507 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 ZC3H18Q86VM9 953 aaKnown RBP18.18■□□□□ 0.5
PHGDH-204ENST00000469443 NRROSQ86YC3 692 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 ACRBPQ8NEB7 543 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 SPATA22Q8NHS9 363 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 HAUS1Q96CS2 278 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 COX14Q96I36 57 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 WDR24Q96S15 920 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 BAG1Q99933 345 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-204ENST00000469443 LACRTQ9GZZ8 138 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 FAM83DQ9H4H8 585 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 SYNDIG1Q9H7V2 258 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 PCDHA3Q9Y5H8 950 aa18.18■□□□□ 0.5
PHGDH-204ENST00000469443 ITPR1Q14643 2758 aa18.17■□□□□ 0.5
PHGDH-204ENST00000469443 A0A087WV48 116 aa18.17■□□□□ 0.5
PHGDH-204ENST00000469443 HACD1B0YJ81 288 aa18.17■□□□□ 0.5
PHGDH-204ENST00000469443 CASC3O15234 703 aaKnown RBP18.17■□□□□ 0.5
PHGDH-204ENST00000469443 TLX3O43711 291 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-204ENST00000469443 CDC25BP30305 580 aa18.17■□□□□ 0.5
PHGDH-204ENST00000469443 ACTN2P35609 894 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms