RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 GPR1P46091 355 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 CSRP3P50461 194 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 PTSQ03393 145 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 MMRN1Q13201 1228 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 NR1D2Q14995 579 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 ASIC2Q16515 512 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 TSR1Q2NL82 804 aaKnown RBP12.22□□□□□ -0.45
HDAC3-204ENST00000469207 SNAP47Q5SQN1 464 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 TMEM164Q5U3C3 297 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 LZTR1Q8N653 840 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 ZSCAN1Q8NBB4 408 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 SCRN2Q96FV2 425 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 NAP1L5Q96NT1 182 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-204ENST00000469207 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 EIF3CQ99613 913 aaKnown RBP12.22□□□□□ -0.45
HDAC3-204ENST00000469207 CTRCQ99895 268 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 MGME1Q9BQP7 344 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 NT5MQ9NPB1 228 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 RTN4Q9NQC3 1192 aaKnown RBP12.22□□□□□ -0.45
HDAC3-204ENST00000469207 COL12A1Q99715 3063 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 ZFC3H1O60293 1989 aaKnown RBP12.21□□□□□ -0.45
HDAC3-204ENST00000469207 EFCAB7A8K855 629 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 STMND1H3BQB6 276 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 H3BRJ5 948 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 INPP4BO15327 924 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 SOCS5O75159 536 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 CD48P09326 243 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 GZMAP12544 262 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 IL4RP24394 825 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 MMP13P45452 471 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 ITKQ08881 620 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 DPYSL2Q16555 572 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 STX1AQ16623 288 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 ATP13A4Q4VNC1 1196 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 COLEC12Q5KU26 742 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 ARMC12Q5T9G4 340 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 MARC1Q5VT66 337 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 LRRC66Q68CR7 880 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 ANKS6Q68DC2 871 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 TMCO3Q6UWJ1 677 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 ATG14Q6ZNE5 492 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 CLEC17AQ6ZS10 378 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 CPNE8Q86YQ8 564 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 IL22RA1Q8N6P7 574 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 SPOCK2Q92563 424 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 AP2M1Q96CW1 435 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 SEMA3CQ99985 751 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.21□□□□□ -0.45
HDAC3-204ENST00000469207 SLC39A1Q9NY26 324 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 KCNK4Q9NYG8 393 aa12.21□□□□□ -0.45
HDAC3-204ENST00000469207 AKAP7Q9P0M2 348 aaPredicted RBP12.21□□□□□ -0.45
HDAC3-204ENST00000469207 HECTD1Q9ULT8 2610 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 HGSO14964 777 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 NKX2-8O15522 239 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 FZD6O60353 706 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 CLDN7O95471 211 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 ATP1A1P05023 1023 aaKnown RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 IVLP07476 585 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 THRAP10827 490 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 CD82P27701 267 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 CSTF2P33240 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 ARL4AP40617 200 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 GPR3P46089 330 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 PPM1FP49593 454 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 PYCR3Q53H96 274 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 BOLA3Q53S33 107 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 FAM129CQ86XR2 697 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 PSTKQ8IV42 348 aaKnown RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 NRSN1Q8IZ57 195 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 UNC5BQ8IZJ1 945 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 OR4D9Q8NGE8 314 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 SLC37A2Q8TED4 501 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 SCARF2Q96GP6 870 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 OR2M4Q96R27 311 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 MCCC1Q96RQ3 725 aaPredicted RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 RIOK2Q9BVS4 552 aaKnown RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 SLC25A18Q9H1K4 315 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 PCDH18Q9HCL0 1135 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 GEMIN8Q9NWZ8 242 aaKnown RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 AIPL1Q9NZN9 384 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 ZNHIT2Q9UHR6 403 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 CHKBQ9Y259 395 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 PPIL1Q9Y3C6 166 aa12.2□□□□□ -0.46
HDAC3-204ENST00000469207 OAS3Q9Y6K5 1087 aaKnown RBP12.2□□□□□ -0.46
HDAC3-204ENST00000469207 A0A1W2PQ67 120 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 DUX1O43812 170 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 RAD1O60671 282 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 ASMTLO95671 621 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 PCK1P35558 622 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 HSPA9P38646 679 aaKnown RBP12.19□□□□□ -0.46
HDAC3-204ENST00000469207 DSC2Q02487 901 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 DPTQ07507 201 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 KLHL30Q0D2K2 578 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 SQSTM1Q13501 440 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 SKIDA1Q1XH10 827 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 ANO6Q4KMQ2 910 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 TMEM71Q6P5X7 295 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 XKR5Q6UX68 686 aa12.19□□□□□ -0.46
HDAC3-204ENST00000469207 CHST15Q7LFX5 561 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms