RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 SLC10A2Q12908 348 aaPredicted RBP14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 NR1D2Q14995 579 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 PDK2Q15119 407 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 IFI16Q16666 785 aaKnown RBP14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 LRRC66Q68CR7 880 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 RAET1GQ6H3X3 334 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 ADAMTSL4Q6UY14 1074 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 NDUFAF2Q8N183 169 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 PQLC3Q8N755 202 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 KCTD6Q8NC69 237 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 KIAA1524Q8TCG1 905 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 TMEM159Q96B96 161 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 FAF2Q96CS3 445 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 POLR1EQ9GZS1 481 aaKnown RBP14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 SEMA6CQ9H3T2 930 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 RBM22Q9NW64 420 aaKnown RBP eCLIP14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 AMACRQ9UHK6 382 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 PLEKHM1Q9Y4G2 1056 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 LOXL2Q9Y4K0 774 aa14.75□□□□□ -0.05
SDCCAG3-209ENST00000468963 MAP3K6O95382 1288 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 ECEL1O95672 775 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 ETV5P41161 510 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 GPR1P46091 355 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 STC1P52823 247 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 DSC2Q02487 901 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 NIPAL4Q0D2K0 466 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 ILF3Q12906 894 aaKnown RBP eCLIP14.74□□□□□ -0.051e-6■□□□□ 9.2
SDCCAG3-209ENST00000468963 ASTE1Q2TB18 679 aaPredicted RBP14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 TAF1BQ53T94 588 aaPredicted RBP14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 TIGD7Q6NT04 549 aaPredicted RBP14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 ZNF574Q6ZN55 896 aaPredicted RBP14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 CCDC81Q6ZN84 652 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 ZNF765Q7L2R6 523 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 RAVER1Q8IY67 606 aaKnown RBP14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 NAGSQ8N159 534 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 LRRN4Q8WUT4 740 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 SCAMP4Q969E2 229 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 AP2M1Q96CW1 435 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 CCNL2Q96S94 520 aaPredicted RBP14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 AGAP2Q99490 1192 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 ZNF670Q9BS34 389 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 SUDS3Q9H7L9 328 aaPredicted RBP14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 CTTNBP2NLQ9P2B4 639 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 UVRAGQ9P2Y5 699 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 PISDQ9UG56 409 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 CD84Q9UIB8 345 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 CHKBQ9Y259 395 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 TMEM98Q9Y2Y6 226 aa14.74□□□□□ -0.05
SDCCAG3-209ENST00000468963 GOLGA6CA6NDK9 693 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 GOLGA6BA6NDN3 693 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 GOLGA6L19H0YKK7 550 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 PPM1DO15297 605 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 CPNE6O95741 557 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 H2AFZP0C0S5 128 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 GOLGA6DP0CG33 693 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 KRT10P13645 584 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 ZNF30P17039 623 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 ITIH1P19827 911 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 CD1CP29017 333 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 GBE1Q04446 702 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 SQSTM1Q13501 440 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 TGIF1Q15583 401 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 CLPPQ16740 277 aaPredicted RBP14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 PYCR3Q53H96 274 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 SLC30A9Q6PML9 568 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 USP53Q70EK8 1073 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 H2AFVQ71UI9 128 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 PIM3Q86V86 326 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 MAP7D3Q8IWC1 876 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 NRSN1Q8IZ57 195 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 PATE1Q8WXA2 126 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 COX14Q96I36 57 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 LYSMD1Q96S90 227 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 TDRD1Q9BXT4 1180 aaKnown RBP14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 PACSIN1Q9BY11 444 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 SEMA4CQ9C0C4 833 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 GOLGA6AQ9NYA3 693 aa14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 CNOT6Q9ULM6 557 aaKnown RBP14.73□□□□□ -0.05
SDCCAG3-209ENST00000468963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.73□□□□□ -0.051e-6■■□□□ 12.4
SDCCAG3-209ENST00000468963 SETXQ7Z333 2677 aaKnown RBP14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 RHPN2P1A8MT19 583 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 CLDN7O95471 211 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 HLA-DQB2P05538 268 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 KRT7P08729 469 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 JMJD7P0C870 316 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 KDELR1P24390 212 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 ALDH4A1P30038 563 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 GPR3P46089 330 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 RPL26P61254 145 aaKnown RBP14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 C16orf72Q14CZ0 275 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 SLC18A3Q16572 532 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 ZSCAN23Q3MJ62 389 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 AMZ1Q400G9 498 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 KIAA1614Q5VZ46 1190 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 JAMLQ86YT9 394 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 RAPGEF5Q92565 580 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 USP7Q93009 1102 aa14.72□□□□□ -0.05
SDCCAG3-209ENST00000468963 RNF157Q96PX1 679 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms