RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 C1orf226A1L170 272 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 BECN2A8MW95 431 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 VCYO14598 125 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 HS6ST1O60243 411 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 PLOD3O60568 738 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 TPPPO94811 219 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 LCATP04180 440 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 SRPRAP08240 638 aaKnown RBP5.16□□□□□ -1.58
LSM5-209ENST00000468872 NR2F1P10589 423 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 HOXA13P31271 388 aaPredicted RBP5.16□□□□□ -1.58
LSM5-209ENST00000468872 NNMTP40261 264 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 MRPL12P52815 198 aaKnown RBP5.16□□□□□ -1.58
LSM5-209ENST00000468872 CTTNQ14247 550 aaKnown RBP5.16□□□□□ -1.58
LSM5-209ENST00000468872 HNF4GQ14541 408 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 NAB2Q15742 525 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 PRTGQ2VWP7 1150 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 PCGF3Q3KNV8 242 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 TMCO3Q6UWJ1 677 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 Q6ZTK2 550 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 DPPA4Q7L190 304 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 LINC00346Q8IVM7 164 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 RNF168Q8IYW5 571 aaPredicted RBP5.16□□□□□ -1.58
LSM5-209ENST00000468872 TRIB2Q92519 343 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 JAKMIP2Q96AA8 810 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 SEPT5Q99719 369 aaPredicted RBP5.16□□□□□ -1.58
LSM5-209ENST00000468872 KCNN2Q9H2S1 579 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 HIPK2Q9H2X6 1198 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 PLAC1Q9HBJ0 212 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 HINT3Q9NQE9 182 aaKnown RBP5.16□□□□□ -1.58
LSM5-209ENST00000468872 OR6C3Q9NZP0 311 aa5.16□□□□□ -1.58
LSM5-209ENST00000468872 R3HDM2Q9Y2K5 976 aaKnown RBP5.16□□□□□ -1.58
LSM5-209ENST00000468872 CTDSP2O14595 271 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 TIMM23O14925 209 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 SOX30O94993 753 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 SYF2O95926 243 aaKnown RBP5.15□□□□□ -1.59
LSM5-209ENST00000468872 DNTTP04053 509 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 CYP1A2P05177 515 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 TMEM11P17152 192 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 CD58P19256 250 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 IL11P20809 199 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 MAOAP21397 527 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 TBXAS1P24557 533 aaPredicted RBP5.15□□□□□ -1.59
LSM5-209ENST00000468872 PON1P27169 355 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 SLC15A1P46059 708 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 MFAP4P55083 255 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 PPATQ06203 517 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 ACSM2AQ08AH3 577 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 ACSM2BQ68CK6 577 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 DLK2Q6UY11 383 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 POC5Q8NA72 575 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 MIGA1Q8NAN2 632 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 SAT2Q96F10 170 aaPredicted RBP5.15□□□□□ -1.59
LSM5-209ENST00000468872 ACOX2Q99424 681 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 NDST4Q9H3R1 872 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 WWOXQ9NZC7 414 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 CLIC4Q9Y696 253 aa5.15□□□□□ -1.59
LSM5-209ENST00000468872 OR2A25A4D2G3 310 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 SYNDIG1LA6NDD5 238 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 A8MV72 311 aaPredicted RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 AKR1B15C9JRZ8 316 aaPredicted RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 SH2B2O14492 632 aaPredicted RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 WNT9BO14905 357 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 ADAM20O43506 726 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 ITM2AO43736 263 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 JRKO75564 520 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 G6PDP11413 515 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 HOXB2P14652 356 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 GPTP24298 496 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 ACADLP28330 430 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 EIF2S3P41091 472 aaKnown RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 CDKN2AP42771 156 aaKnown RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 NRIP1P48552 1158 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 ENTPD1P49961 510 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 METAP2P50579 478 aaKnown RBP eCLIP5.14□□□□□ -1.59
LSM5-209ENST00000468872 TAS2R40P59535 323 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 ZBED6P86452 979 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 TFAP4Q01664 338 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 NEDD9Q14511 834 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 PCLAFQ15004 111 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 EIF2S3LQ2VIR3 472 aaKnown RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 SHFQ7M4L6 423 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 TSPAN33Q86UF1 283 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 SPATA6LQ8N4H0 392 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 IL17RCQ8NAC3 791 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 SLC22A18Q96BI1 424 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 PCGF1Q9BSM1 259 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 WSB2Q9NYS7 404 aaPredicted RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 CWC15Q9P013 229 aaKnown RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 SEC63Q9UGP8 760 aaKnown RBP5.14□□□□□ -1.59
LSM5-209ENST00000468872 RCOR1Q9UKL0 485 aa5.14□□□□□ -1.59
LSM5-209ENST00000468872 KAT6BQ8WYB5 2073 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 A0A1W2PR77 199 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 H3BQ06 376 aaPredicted RBP5.13□□□□□ -1.59
LSM5-209ENST00000468872 ATP2A1O14983 1001 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 PAPSS1O43252 624 aaPredicted RBP5.13□□□□□ -1.59
LSM5-209ENST00000468872 VNN2O95498 520 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 NAGAP17050 411 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 HSD17B4P51659 736 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 TMEM198Q66K66 360 aa5.13□□□□□ -1.59
LSM5-209ENST00000468872 B3GNT6Q6ZMB0 384 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms