RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 USP29Q9HBJ7 922 aa14.48□□□□□ -0.09
COL27A1-203ENST00000468565 APOBEC3BQ9UH17 382 aaKnown RBP14.48□□□□□ -0.09
COL27A1-203ENST00000468565 RAI2Q9Y5P3 530 aa14.48□□□□□ -0.09
COL27A1-203ENST00000468565 USP24Q9UPU5 2620 aa14.48□□□□□ -0.09
COL27A1-203ENST00000468565 PSMD11O00231 422 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 TPP1O14773 563 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 FZD6O60353 706 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 PHF2O75151 1096 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 NEBLO76041 1014 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 PCCBP05166 539 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 IVLP07476 585 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 KRT10P13645 584 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 HTR1BP28222 390 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 ECHS1P30084 290 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 CTNNA1P35221 906 aaKnown RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 BLKP51451 505 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 CNGA3Q16281 694 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 USP45Q70EL2 814 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 NDUFAF2Q8N183 169 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 CCNYQ8ND76 341 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 PIH1D2Q8WWB5 315 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 KRT35Q92764 455 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 SCRN2Q96FV2 425 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 COQ10AQ96MF6 247 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 RUNDC3BQ96NL0 473 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 EVA1BQ9NVM1 165 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 PNMA8BQ9ULN7 279 aaPredicted RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 IGF2RP11717 2491 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 KMT2BQ9UMN6 2715 aaPredicted RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 ASPMQ8IZT6 3477 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 K7ESM1 405 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 HLA-DQB2P05538 268 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 HOXC4P09017 264 aaPredicted RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 CKMT1AP12532 417 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 CA4P22748 312 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 KIAA1024LP59773 190 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 IFI35P80217 286 aaPredicted RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 DAB2P98082 770 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 DSC2Q02487 901 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 PPARDQ03181 441 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 ACOX1Q15067 660 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 PDK1Q15118 436 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 TAZQ16635 292 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 ESRP1Q6NXG1 681 aaKnown RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 ZCCHC8Q6NZY4 707 aaKnown RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 RFX6Q8HWS3 928 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 RBFAQ8N0V3 343 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 CBARPQ8N350 705 aaPredicted RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 ARRDC2Q8TBH0 407 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 LMX1AQ8TE12 382 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 APOLD1Q96LR9 279 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 OLFM3Q96PB7 478 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 LGMNQ99538 433 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 IL12RB2Q99665 862 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 TDRD1Q9BXT4 1180 aaKnown RBP14.47□□□□□ -0.09
COL27A1-203ENST00000468565 SLC13A1Q9BZW2 595 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 BRD8Q9H0E9 1235 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 PCDHA3Q9Y5H8 950 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 HEY1Q9Y5J3 304 aa14.47□□□□□ -0.09
COL27A1-203ENST00000468565 ASXL3Q9C0F0 2248 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 GOLGA6L10A6NI86 522 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 A8MX80 341 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 PPP1R12AO14974 1030 aaPredicted RBP14.46□□□□□ -0.09
COL27A1-203ENST00000468565 CDKN2BP42772 138 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 HNRNPH2P55795 449 aaKnown RBP14.46□□□□□ -0.09
COL27A1-203ENST00000468565 RWDD2BP57060 319 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 TUBB8Q3ZCM7 444 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 FAXCQ5TGI0 409 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 MFSD7Q6UXD7 560 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 PLA2G15Q8NCC3 412 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 NUS1Q96E22 293 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 WDR92Q96MX6 357 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 LRRC61Q9BV99 259 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 TCEAL2Q9H3H9 227 aaPredicted RBP14.46□□□□□ -0.09
COL27A1-203ENST00000468565 NCKIPSDQ9NZQ3 722 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 PLAAQ9Y263 795 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 TTLL3Q9Y4R7 772 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 OR1A2Q9Y585 309 aa14.46□□□□□ -0.09
COL27A1-203ENST00000468565 NPIPB15A6NHN6 443 aaPredicted RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 CACNB4O00305 520 aaPredicted RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 RASGRP1O95267 797 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 PDHA1P08559 390 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 LHCGRP22888 699 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 HNF1BP35680 557 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 TRIM23P36406 574 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 MARCKSL1P49006 195 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 DUSP3P51452 185 aaPredicted RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 HK3P52790 923 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 RPL26P61254 145 aaKnown RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 E2F1Q01094 437 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 ARHGEF7Q14155 803 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 TFDP2Q14188 446 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 IHHQ14623 411 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 TTMPQ5BVD1 217 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 ENPP7Q6UWV6 458 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 BZW1Q7L1Q6 419 aaKnown RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 KATNAL2Q8IYT4 538 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 CACTIN-AS1Q8N1I8 211 aa14.45□□□□□ -0.1
COL27A1-203ENST00000468565 FSTL5Q8N475 847 aaPredicted RBP14.45□□□□□ -0.1
COL27A1-203ENST00000468565 LRRN4Q8WUT4 740 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms