RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RALGDSQ12967 914 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 ARHGEF7Q14155 803 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 CNGA3Q16281 694 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 ESRP1Q6NXG1 681 aaKnown RBP6.86□□□□□ -1.31
SCAF4-204ENST00000467731 UNC5AQ6ZN44 842 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 DPPA4Q7L190 304 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 PALM2Q8IXS6 379 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 TTC30BQ8N4P2 665 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 OR4K2Q8NGD2 314 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 OR13J1Q8NGT2 312 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 RAB7BQ96AH8 199 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 PBXIP1Q96AQ6 731 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 FAM131CQ96AQ9 280 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 ZNF669Q96BR6 464 aaPredicted RBP6.86□□□□□ -1.31
SCAF4-204ENST00000467731 DNAJC1Q96KC8 554 aaKnown RBP6.86□□□□□ -1.31
SCAF4-204ENST00000467731 FCRL3Q96P31 734 aaPredicted RBP6.86□□□□□ -1.31
SCAF4-204ENST00000467731 NAT9Q9BTE0 207 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 WRAP53Q9BUR4 548 aaKnown RBP6.86□□□□□ -1.31
SCAF4-204ENST00000467731 MRM3Q9HC36 420 aaKnown RBP6.86□□□□□ -1.31
SCAF4-204ENST00000467731 BPIFA1Q9NP55 256 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 NINJ2Q9NZG7 142 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 IL1RAPL1Q9NZN1 696 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 EBF1Q9UH73 591 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 FADS3Q9Y5Q0 445 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 CEP192Q8TEP8 1941 aa6.86□□□□□ -1.31
SCAF4-204ENST00000467731 PLXNA2O75051 1894 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ZCWPW2A0A1B0GU75 182 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 GOLGA6L10A6NI86 522 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 GOLGA8CPA6NN73 597 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ENO4A6NNW6 628 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 CCL22O00626 93 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ATP6V1G1O75348 118 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ALDH1A2O94788 518 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 TTC4O95801 387 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ELFN1P0C7U0 828 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 LPOP22079 712 aaPredicted RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 VIPR1P32241 457 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 LIG3P49916 1009 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ZNF140P52738 457 aaPredicted RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 GPX6P59796 221 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 TMPRSS15P98073 1019 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 SMAD1Q15797 465 aaKnown RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ANKRD20A4Q4UJ75 823 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 LRRC23Q53EV4 343 aaPredicted RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 BEND6Q5SZJ8 279 aaPredicted RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 TSTD2Q5T7W7 516 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 C3orf62Q6ZUJ4 267 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 USP30Q70CQ3 517 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 FAM124AQ86V42 546 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 KBTBD6Q86V97 674 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 OR14C36Q8NHC7 312 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 HNRNPLLQ8WVV9 542 aaKnown RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 UBLCP1Q8WVY7 318 aaPredicted RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 SRPK1Q96SB4 655 aaKnown RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 TPSD1Q9BZJ3 242 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ACBD3Q9H3P7 528 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 TREX1Q9NSU2 369 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 PLXND1Q9Y4D7 1925 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 PIKFYVEQ9Y2I7 2098 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 RIPK2O43353 540 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 PLRG1O43660 514 aaKnown RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ZNF30P17039 623 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ACSL1P33121 698 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 CXCL12P48061 93 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 SUOXP51687 545 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ARSDP51689 593 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ADPRHP54922 357 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 PDE1BQ01064 536 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 NAA25Q14CX7 972 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 UAP1Q16222 522 aaPredicted RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 SLC30A9Q6PML9 568 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 LIPIQ6XZB0 460 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 RASSF3Q86WH2 238 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 CCNJLQ8IV13 435 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 UNC5BQ8IZJ1 945 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 KNL1Q8NG31 2342 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 GSDMBQ8TAX9 411 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 STYXQ8WUJ0 223 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 TTC25Q96NG3 672 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 IER2Q9BTL4 223 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 TRIM4Q9C037 500 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 EPB41L4BQ9H329 900 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 VPS37BQ9H9H4 285 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 ARFGAP3Q9NP61 516 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 IL17CQ9P0M4 197 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 USP36Q9P275 1121 aaKnown RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 FZD4Q9ULV1 537 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 NCKAP1Q9Y2A7 1128 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 FNDC3AQ9Y2H6 1198 aaKnown RBP6.85□□□□□ -1.31
SCAF4-204ENST00000467731 COQ6Q9Y2Z9 468 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 PKP3Q9Y446 797 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 SPAG17Q6Q759 2223 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 PLXNB3Q9ULL4 1909 aa6.85□□□□□ -1.31
SCAF4-204ENST00000467731 TCRBV9S1A1TA0A576 114 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 PRR23AA6NEV1 266 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 FAM47DPA6NHR8 397 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 GOLGA8KD6RF30 607 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 H0Y858 1186 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 GOLGA8TH3BQL2 631 aa6.84□□□□□ -1.31
SCAF4-204ENST00000467731 STX7O15400 261 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms