RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TARSL2A2RTX5 802 aaKnown RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 FAM47DPA6NHR8 397 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ZNF233A6NK53 670 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 PRAMEF26H0Y7S4 382 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 TMX2-CTNND1H3BSU7 103 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 SCAMP1O15126 338 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 NVLO15381 856 aaKnown RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 SLC7A4O43246 635 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 TNFSF15O95150 251 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 C8BP07358 591 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 THEGLP0DJG4 465 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 RALAP11233 206 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 RARGP13631 454 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 GAP43P17677 238 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 POLR2EP19388 210 aaKnown RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 C5AR1P21730 350 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 HOXD9P28356 352 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 HLA-FP30511 346 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 CORO1AP31146 461 aaKnown RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 GPR3P46089 330 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ADPRHP54922 357 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ST8SIA6P61647 398 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ODF1Q14990 250 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ZRSR1Q15695 479 aaKnown RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 TBR1Q16650 682 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 HNRNPA1L2Q32P51 320 aaKnown RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 WDR72Q3MJ13 1102 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ALFQ53S48 1182 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 PAQR9Q6ZVX9 377 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 TRAPPC11Q7Z392 1133 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 CCDC186Q7Z3E2 898 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ADIPOR2Q86V24 386 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 TRIM69Q86WT6 500 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 TICAM1Q8IUC6 712 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 FUKQ8N0W3 1084 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 GPD1LQ8N335 351 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 IFI44Q8TCB0 444 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 SORCS1Q8WY21 1168 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ERCC4Q92889 916 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 SYAP1Q96A49 352 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 FAM131CQ96AQ9 280 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 P2RY11Q96G91 374 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ATXN7L3BQ96GX2 97 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 APOLD1Q96LR9 279 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 GBP4Q96PP9 640 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 SYT3Q9BQG1 590 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 MED10Q9BTT4 135 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 SLC13A1Q9BZW2 595 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 B3GNT4Q9C0J1 378 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 NEUROG2Q9H2A3 272 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 DPEP3Q9H4B8 488 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 OLFML3Q9NRN5 406 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 MKS1Q9NXB0 559 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 PPP4R1LQ9P1A2 415 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ARHGAP20Q9P2F6 1191 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 STOML2Q9UJZ1 356 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 AGO1Q9UL18 857 aaKnown RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 NME7Q9Y5B8 376 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 PCDHGA9Q9Y5G4 932 aaKnown RBP5.58□□□□□ -1.52
PTCD3-207ENST00000467273 PCDHGA6Q9Y5G7 932 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 PCDHGA3Q9Y5H0 932 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 CSNK1G3Q9Y6M4 447 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 ITPR3Q14573 2671 aa5.58□□□□□ -1.52
PTCD3-207ENST00000467273 NBASA2RRP1 2371 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 NPEPPSL1A6NEC2 478 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 MID1O15344 667 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 JAK2O60674 1132 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 PIAS2O75928 621 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 MTA2O94776 668 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 SNUPNO95149 360 aaKnown RBP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 GIMD1P0DJR0 217 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 FAHP16930 419 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 CD82P27701 267 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 SLC8A1P32418 973 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 DDIT3P35638 169 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 PEX19P40855 299 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 UBA7P41226 1012 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 PGFP49763 221 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 TOB1P50616 345 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 HNRNPKP61978 463 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 HMGN5P82970 282 aaKnown RBP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 GUCY1B3Q02153 619 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 ME3Q16798 604 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 BMT2Q1RMZ1 405 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 SETMARQ53H47 684 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 RILPL1Q5EBL4 403 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 CHST9Q7L1S5 443 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 DSG4Q86SJ6 1040 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 SYCP3Q8IZU3 236 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 CRYBG2Q8N1P7 616 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 MYO1HQ8N1T3 1032 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 ARHGAP18Q8N392 663 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 NECAB1Q8N987 351 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 VPS37AQ8NEZ2 397 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 ZMIZ2Q8NF64 920 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 OR5B17Q8NGF7 314 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 OR14C36Q8NHC7 312 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 JPH3Q8WXH2 748 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-207ENST00000467273 ASB15Q8WXK1 588 aa5.57□□□□□ -1.52
PTCD3-207ENST00000467273 LARP4BQ92615 738 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms