RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SRCP12931 536 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 AOC1P19801 751 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 MC4RP32245 332 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 CSNK1DP48730 415 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 RPL14P50914 215 aaKnown RBP18.22■□□□□ 0.51
COL9A3-205ENST00000466192 PEX6Q13608 980 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 ZNF77Q15935 545 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 PSAPL1Q6NUJ1 521 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 KLC3Q6P597 504 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 RBM23Q86U06 439 aaKnown RBP18.22■□□□□ 0.51
COL9A3-205ENST00000466192 PIANPQ8IYJ0 282 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 RBM15BQ8NDT2 890 aaKnown RBP18.22■□□□□ 0.51
COL9A3-205ENST00000466192 LPGAT1Q92604 370 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 AARSD1Q9BTE6 412 aaKnown RBP18.22■□□□□ 0.51
COL9A3-205ENST00000466192 DENND2DQ9H6A0 471 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-205ENST00000466192 ZDHHC2Q9UIJ5 367 aa18.22■□□□□ 0.51
COL9A3-205ENST00000466192 UBA6A0AVT1 1052 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 SPECC1L-ADORA2AF8WAN1 911 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 MATN2O00339 956 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 HTRA2O43464 458 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 GM2AP17900 193 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 BCL2L1Q07817 233 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 ILF2Q12905 390 aaKnown RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 C9orf50Q5SZB4 431 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 LYSMD3Q7Z3D4 306 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 LSMEM2Q8N112 164 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 LEMD2Q8NC56 503 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 ING5Q8WYH8 240 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 IRF7Q92985 503 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 VOPP1Q96AW1 172 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 ZNF707Q96C28 371 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 BBS2Q9BXC9 721 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 MAGEE1Q9HCI5 957 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 CYP4F12Q9HCS2 524 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 IL17CQ9P0M4 197 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 FNDC3AQ9Y2H6 1198 aaKnown RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 ZNF106Q9H2Y7 1883 aaKnown RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 E9PBE3 544 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 KLHL41O60662 606 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 IGSF6O95976 241 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 TFEBP19484 476 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 KCNA5P22460 613 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 ATP5F1P24539 256 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 SLC26A3P40879 764 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 SUOXP51687 545 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 PFKPQ01813 784 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 PRKAA1Q13131 559 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 CBX2Q14781 532 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 ACAP2Q15057 778 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 METTL3Q86U44 580 aaKnown RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 TMPRSS6Q8IU80 811 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 FAM136AQ96C01 138 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 TCF12Q99081 682 aa18.21■□□□□ 0.51
COL9A3-205ENST00000466192 LBHD1Q9BQE6 289 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-205ENST00000466192 GOLGA8QA0A0J9YX86 632 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 GOLGA8OA6NCC3 632 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 SOBPA7XYQ1 873 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 GOLGA8NF8WBI6 632 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 H7C0S8 307 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 ENTPD5O75356 428 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 HOXB8P17481 243 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-205ENST00000466192 CEBPBP17676 345 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 FMO4P31512 558 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 ASPHQ12797 758 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 SEL1L3Q68CR1 1132 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 TRIM67Q6ZTA4 783 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 RYBPQ8N488 228 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-205ENST00000466192 POU5F2Q8N7G0 328 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 OR2AP1Q8NGE2 309 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 OR52B2Q96RD2 323 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 GPR63Q9BZJ6 419 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 WDR55Q9H6Y2 383 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-205ENST00000466192 SPHK2Q9NRA0 654 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 NCKIPSDQ9NZQ3 722 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 HS3ST2Q9Y278 367 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 MED16Q9Y2X0 877 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 NUP210Q8TEM1 1887 aaPredicted RBP18.2■□□□□ 0.5
COL9A3-205ENST00000466192 C2orf16Q68DN1 1984 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 NEMP1O14524 444 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 HDAC3O15379 428 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 NDUFS3O75489 264 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 WFS1O76024 890 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 RBP1P09455 135 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 TYRP14679 529 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 CCND1P24385 295 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 HMGCLP35914 325 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 MAPK8P45983 427 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 MXRA7P84157 204 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 XIAPP98170 497 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 ADGRD2Q7Z7M1 963 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 ISCA2Q86U28 154 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 NUF2Q9BZD4 464 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 ALG9Q9H6U8 611 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 TCF7L2Q9NQB0 619 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 ZDHHC7Q9NXF8 308 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 WNT6Q9Y6F9 365 aa18.2■□□□□ 0.5
COL9A3-205ENST00000466192 ANKRD12Q6UB98 2062 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 A0A0J9YYE9 177 aa18.19■□□□□ 0.5
COL9A3-205ENST00000466192 DCXO43602 365 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms