RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 DENND5AQ6IQ26 1287 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 TTC27Q6P3X3 843 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 MACC1Q6ZN28 852 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 DBX2Q6ZNG2 339 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 ZNF765Q7L2R6 523 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 PIP4P1Q86T03 277 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 NLRP8Q86W28 1048 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 PARGQ86W56 976 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 HEATR4Q86WZ0 1026 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 TTC30BQ8N4P2 665 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 DEFB124Q8NES8 71 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 ATL2Q8NHH9 583 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 RHBDD1Q8TEB9 315 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 SAP25Q8TEE9 199 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 TSACCQ96A04 125 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-202ENST00000465601 CAPZA3Q96KX2 299 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 WDR92Q96MX6 357 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 TCEAL2Q9H3H9 227 aaPredicted RBP12.34□□□□□ -0.43
CHPF2-202ENST00000465601 TRABDQ9H4I3 376 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 WDR26Q9H7D7 661 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 BPIFA1Q9NP55 256 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 RAB6BQ9NRW1 208 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 PAK5Q9P286 719 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 BTBD3Q9Y2F9 522 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 MYLKQ15746 1914 aa12.34□□□□□ -0.43
CHPF2-202ENST00000465601 RP1P56715 2156 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 LRP4O75096 1905 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 NCOR2Q9Y618 2525 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 ZFC3H1O60293 1989 aaKnown RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 RGSL1A5PLK6 1076 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 TMEM202A6NGA9 273 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 SCAMP1O15126 338 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 YKT6O15498 198 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 BUD23O43709 281 aaKnown RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 AP2A1O95782 977 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 SOD1P00441 154 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 CSF2P04141 144 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 HOXC4P09017 264 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 BPIP17213 487 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 TPH1P17752 444 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 KCNA4P22459 653 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 DGKAP23743 735 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 LMAN1P49257 510 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 KIAA1024LP59773 190 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 CDK3Q00526 305 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 PPARDQ03181 441 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 TRIP13Q15645 432 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 RD3Q7Z3Z2 195 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 GLT6D1Q7Z4J2 308 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 HID1Q8IV36 788 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 NAXDQ8IW45 347 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 RAVER1Q8IY67 606 aaKnown RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 RBFAQ8N0V3 343 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 SLC25A45Q8N413 288 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 GPR26Q8NDV2 337 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 LRRC45Q96CN5 670 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 TEX101Q9BY14 249 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 LRRC40Q9H9A6 602 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 ARNT2Q9HBZ2 717 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 PHPT1Q9NRX4 125 aaPredicted RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 PIH1D1Q9NWS0 290 aaKnown RBP12.33□□□□□ -0.44
CHPF2-202ENST00000465601 UCKL1Q9NWZ5 548 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 HACD3Q9P035 362 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 SAR1BQ9Y6B6 198 aa12.33□□□□□ -0.44
CHPF2-202ENST00000465601 E7EVH7 732 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 GIPC1O14908 333 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 INPP4BO15327 924 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 FLRT2O43155 660 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 PIAS2O75928 621 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 MYCLP1P12525 358 aaPredicted RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 CSRP1P21291 193 aaKnown RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 TEAD1P28347 426 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 HMGCLP35914 325 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 SRP54P61011 504 aaKnown RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 HNRNPKP61978 463 aaKnown RBP eCLIP12.32□□□□□ -0.443e-7■□□□□ 8.2
CHPF2-202ENST00000465601 ETF1P62495 437 aaKnown RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 MSLNQ13421 630 aaPredicted RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 C1orf61Q13536 156 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 PTPRCAPQ14761 206 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 CYP1B1Q16678 543 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 ALG11Q2TAA5 492 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 HENMT1Q5T8I9 393 aaKnown RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 KCTD16Q68DU8 428 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 CCDC137Q6PK04 289 aaKnown RBP12.32□□□□□ -0.44
CHPF2-202ENST00000465601 ADAMTSL4Q6UY14 1074 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 KANSL1Q7Z3B3 1105 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 TRIM74Q86UV6 250 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 PHACTR4Q8IZ21 702 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 EID2Q8N6I1 236 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 OR56A4Q8NGH8 313 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 LMX1AQ8TE12 382 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 OR1E3Q8WZA6 343 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 SPATA16Q9BXB7 569 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 SLC32A1Q9H598 525 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 FGF22Q9HCT0 170 aa12.32□□□□□ -0.44
CHPF2-202ENST00000465601 MRPL40Q9NQ50 206 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms