RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 TMEM31Q5JXX7 168 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 C6orf89Q6UWU4 347 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 UNC5AQ6ZN44 842 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 DPPA4Q7L190 304 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 PIGWQ7Z7B1 504 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 LRRC6Q86X45 466 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 TTC30BQ8N4P2 665 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 ANKRD42Q8N9B4 389 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 CFAP36Q96G28 342 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 SEC16BQ96JE7 1060 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 SRPK1Q96SB4 655 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 TPSD1Q9BZJ3 242 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 HACD3Q9P035 362 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 ZNF711Q9Y462 761 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 ARL5AQ9Y689 179 aa16.91■□□□□ 0.3
EXOSC3-203ENST00000465229 C1orf232A0A0U1RR37 186 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 SLC7A4O43246 635 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 LDB2O43679 373 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 ZWINTO95229 277 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 CLDN7O95471 211 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 IGLV3-19P01714 112 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 CYP2A6P11509 494 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 PPARDQ03181 441 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 ELP6Q0PNE2 266 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 TAF1AQ15573 450 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 TMEM52BQ4KMG9 183 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 PCID2Q5JVF3 399 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 LRRC66Q68CR7 880 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 ZNF449Q6P9G9 518 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 RGS9BPQ6ZS82 235 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 LYSMD3Q7Z3D4 306 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 GLT6D1Q7Z4J2 308 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 FAM124AQ86V42 546 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 C1orf210Q8IVY1 113 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 LRRC34Q8IZ02 419 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 CACNA2D3Q8IZS8 1091 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 CBARPQ8N350 705 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 OR14C36Q8NHC7 312 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 RANBP9Q96S59 729 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 GPR63Q9BZJ6 419 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 ZMYND15Q9H091 742 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 ZFYVE1Q9HBF4 777 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 PRMT8Q9NR22 394 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 CHRAC1Q9NRG0 131 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 KCTD3Q9Y597 815 aa16.9■□□□□ 0.3
EXOSC3-203ENST00000465229 HEATR9A2RTY3 570 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 MROH6A6NGR9 719 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 FAM159BA6NKW6 160 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 NEMP1O14524 444 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 PLRG1O43660 514 aaKnown RBP16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 AVPR2P30518 371 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 HOXA6P31267 233 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 ADPRHP54922 357 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 SEPT6Q14141 434 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 CNGA3Q16281 694 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 LGSNQ5TDP6 509 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 CASC4Q6P4E1 433 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 TSSK4Q6SA08 328 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 LIPIQ6XZB0 460 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 MAML2Q8IZL2 1156 aaPredicted RBP16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 DTWD2Q8NBA8 298 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 MGARPQ8TDB4 240 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 STAMBPL1Q96FJ0 436 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 ZNF778Q96MU6 729 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 KIFC1Q9BW19 673 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 C11orf16Q9NQ32 467 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 MOCS1Q9NZB8 636 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 TCAF1Q9Y4C2 921 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 MAD1L1Q9Y6D9 718 aa16.89■□□□□ 0.29
EXOSC3-203ENST00000465229 A0A1W2PPM1 405 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 MAGEB16A2A368 324 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 TM9SF1O15321 606 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 TSPAN6O43657 245 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 BUD23O43709 281 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 ZNF217O75362 1048 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 CRTAMO95727 393 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 VIMP08670 466 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 KRT4P19013 534 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 ACSL1P33121 698 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 HMGCLP35914 325 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 LIG3P49916 1009 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 WDR4P57081 412 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 DMWDQ09019 674 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 NAB1Q13506 487 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 ARHGEF7Q14155 803 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 PTPRCAPQ14761 206 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 LRRC14Q15048 493 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 PPHLN1Q8NEY8 458 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 RLN3Q8WXF3 142 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 MTBPQ96DY7 904 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 TRIM56Q9BRZ2 755 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 WRAP53Q9BUR4 548 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 BTBD1Q9H0C5 482 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 SOX13Q9UN79 622 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 CYP8B1Q9UNU6 501 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 RRP15Q9Y3B9 282 aaKnown RBP16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 FAM169AQ9Y6X4 670 aa16.88■□□□□ 0.29
EXOSC3-203ENST00000465229 CCDC78A2IDD5 438 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms