RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 PREBQ9HCU5 417 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 HACD3Q9P035 362 aa17.47■□□□□ 0.39
CPSF4-209ENST00000465132 KNTC1P50748 2209 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 AP2A1O95782 977 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 MMP2P08253 660 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 ABCG1P45844 678 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 TAS2R38P59533 333 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 PCSK7Q16549 785 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 PPP1R21Q6ZMI0 780 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 JAMLQ86YT9 394 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 RAVER1Q8IY67 606 aaKnown RBP17.46■□□□□ 0.39
CPSF4-209ENST00000465132 MMGT1Q8N4V1 131 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 IPMKQ8NFU5 416 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 SPATA22Q8NHS9 363 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 TBL1YQ9BQ87 522 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 MLPHQ9BV36 600 aaPredicted RBP17.46■□□□□ 0.39
CPSF4-209ENST00000465132 L2HGDHQ9H9P8 463 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 ETNK1Q9HBU6 452 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 CA5BQ9Y2D0 317 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 AK5Q9Y6K8 562 aa17.46■□□□□ 0.39
CPSF4-209ENST00000465132 LOC285095A0A1B0GVY8 99 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 ANKRD66B4E2M5 251 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 TLX3O43711 291 aaPredicted RBP17.45■□□□□ 0.38
CPSF4-209ENST00000465132 FZD6O60353 706 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 RNGTTO60942 597 aaKnown RBP17.45■□□□□ 0.38
CPSF4-209ENST00000465132 SDC3O75056 442 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 MT-CYBP00156 380 aaPredicted RBP17.45■□□□□ 0.38
CPSF4-209ENST00000465132 APRTP07741 180 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 TPSB2P20231 275 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 GKP32189 559 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 EIF2S3P41091 472 aaKnown RBP17.45■□□□□ 0.38
CPSF4-209ENST00000465132 PDE1BQ01064 536 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 SEMG2Q02383 582 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 C2orf54Q08AI8 447 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 TRAF2Q12933 501 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 CALCOCO2Q13137 446 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 ARHGEF7Q14155 803 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 RTP5Q14D33 572 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 TPSAB1Q15661 275 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 PROX2Q3B8N5 592 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 PIP5KL1Q5T9C9 394 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 ARMC3Q5W041 872 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 PARS2Q7L3T8 475 aaKnown RBP17.45■□□□□ 0.38
CPSF4-209ENST00000465132 KLHDC8BQ8IXV7 354 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 PPIL6Q8IXY8 311 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 TMEM145Q8NBT3 493 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 LPCAT1Q8NF37 534 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 ARRDC3Q96B67 414 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 SCRN2Q96FV2 425 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 KLHDC7BQ96G42 594 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 C1QTNF7Q9BXJ2 289 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 TRABDQ9H4I3 376 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 UBP1Q9NZI7 540 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 CHKBQ9Y259 395 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 PPIL1Q9Y3C6 166 aa17.45■□□□□ 0.38
CPSF4-209ENST00000465132 SMG1Q96Q15 3661 aaKnown RBP17.44■□□□□ 0.38
CPSF4-209ENST00000465132 TTC24A2A3L6 582 aaPredicted RBP17.44■□□□□ 0.38
CPSF4-209ENST00000465132 EFCAB8A8MWE9 144 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 TRIM38O00635 465 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 SUN1O94901 812 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 METTL18O95568 372 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 ZNF30P17039 623 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 ACP1P24666 158 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 ITPKBP27987 946 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 CAV1Q03135 178 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 CDH17Q12864 832 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 TRIP13Q15645 432 aaPredicted RBP17.44■□□□□ 0.38
CPSF4-209ENST00000465132 KIAA1161Q6NSJ0 714 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 KDELC1Q6UW63 502 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 HOOK3Q86VS8 718 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 CACTIN-AS1Q8N1I8 211 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 SLC25A45Q8N413 288 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 DNAAF3Q8N9W5 541 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 CXorf40AQ8TE69 158 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 SNF8Q96H20 258 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 OXNAD1Q96HP4 312 aaPredicted RBP17.44■□□□□ 0.38
CPSF4-209ENST00000465132 ARNT2Q9HBZ2 717 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 MAGEE1Q9HCI5 957 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 RAD18Q9NS91 495 aa17.44■□□□□ 0.38
CPSF4-209ENST00000465132 LOC400499M0QZD8 3231 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 A0A0J9YYE9 177 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 A0A1W2PQU0 124 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 EIF4E1BA6NMX2 242 aaKnown RBP17.43■□□□□ 0.38
CPSF4-209ENST00000465132 PSMD11O00231 422 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 SLC31A1O15431 190 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 TTI1O43156 1089 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 SIGLEC6O43699 453 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 TRBC1P01850 177 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 THEGLP0DJG4 465 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 TIMP2P16035 220 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 ITIH2P19823 946 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 PTGIRP43119 386 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 RPS21P63220 83 aaKnown RBP17.43■□□□□ 0.38
CPSF4-209ENST00000465132 INSM1Q01101 510 aaPredicted RBP17.43■□□□□ 0.38
CPSF4-209ENST00000465132 SLC1A5Q15758 541 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 RANBP10Q6VN20 620 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 HORMAD1Q86X24 394 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 PIH1D2Q8WWB5 315 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 KLK6Q92876 244 aa17.43■□□□□ 0.38
CPSF4-209ENST00000465132 MRGPRX2Q96LB1 330 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms