RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 MEPCEQ7L2J0 689 aaKnown RBP4.18□□□□□ -1.74
CLK1-208ENST00000464454 CCDC13Q8IYE1 715 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 RNF168Q8IYW5 571 aaPredicted RBP4.18□□□□□ -1.74
CLK1-208ENST00000464454 CLIP4Q8N3C7 705 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 AADATQ8N5Z0 425 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 CLEC18CQ8NCF0 446 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 ARRDC2Q8TBH0 407 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 ERGIC1Q969X5 290 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 CCDC34Q96HJ3 373 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 LRFN5Q96NI6 719 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 SEPT5Q99719 369 aaPredicted RBP4.18□□□□□ -1.74
CLK1-208ENST00000464454 NDST4Q9H3R1 872 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 MKKSQ9NPJ1 570 aaPredicted RBP4.18□□□□□ -1.74
CLK1-208ENST00000464454 GPR108Q9NPR9 543 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 CLIC5Q9NZA1 410 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 RCOR1Q9UKL0 485 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 STON1Q9Y6Q2 735 aa4.18□□□□□ -1.74
CLK1-208ENST00000464454 KRTAP29-1A8MX34 341 aaPredicted RBP4.17□□□□□ -1.74
CLK1-208ENST00000464454 B4DLN1 442 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 HS6ST1O60243 411 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 TMCC2O75069 709 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 JRKO75564 520 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 CH25HO95992 272 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 DDX5P17844 614 aaKnown RBP4.17□□□□□ -1.74
CLK1-208ENST00000464454 GCH1P30793 250 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 HOXA13P31271 388 aaPredicted RBP4.17□□□□□ -1.74
CLK1-208ENST00000464454 METAP2P50579 478 aaKnown RBP eCLIP4.17□□□□□ -1.74
CLK1-208ENST00000464454 SNX16P57768 344 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 ECT2LQ008S8 904 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 IRF3Q14653 427 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 SOWAHCQ53LP3 525 aaPredicted RBP4.17□□□□□ -1.74
CLK1-208ENST00000464454 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 METTL2BQ6P1Q9 378 aaKnown RBP4.17□□□□□ -1.74
CLK1-208ENST00000464454 MTSS1LQ765P7 747 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 ENOSF1Q7L5Y1 443 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 SHFQ7M4L6 423 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 HACE1Q8IYU2 909 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 OR14L1PQ8NHC6 308 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 JAKMIP2Q96AA8 810 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 METTL2AQ96IZ6 378 aaKnown RBP4.17□□□□□ -1.74
CLK1-208ENST00000464454 HINT3Q9NQE9 182 aaKnown RBP4.17□□□□□ -1.74
CLK1-208ENST00000464454 SUCLA2Q9P2R7 463 aaPredicted RBP4.17□□□□□ -1.74
CLK1-208ENST00000464454 FBXL17Q9UF56 701 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 PCDHGB4Q9UN71 923 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 SNX8Q9Y5X2 465 aa4.17□□□□□ -1.74
CLK1-208ENST00000464454 A0A0U1RQJ8 604 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 A0A1W2PQ09 198 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 LINC01553A4QN01 128 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 CDRT15L2A8MXV6 281 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 ACOT8O14734 319 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 TIMM23O14925 209 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 TIMM44O43615 452 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 SLC28A2O43868 658 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 DAB1O75553 588 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 GJB3O75712 270 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 STARD3NLO95772 234 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 GABRB1P18505 474 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 CCKBRP32239 447 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 ACSL1P33121 698 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 PIGAP37287 484 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 CAMPP49913 170 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 CLCN3P51790 818 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 DSCR9P59020 149 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 STK4Q13043 487 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 IKQ13123 557 aaPredicted RBP4.16□□□□□ -1.74
CLK1-208ENST00000464454 KEAP1Q14145 624 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 ASIC2Q16515 512 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 MMEL1Q495T6 779 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 CDONQ4KMG0 1287 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 ZNF585BQ52M93 769 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 PPP6R3Q5H9R7 873 aaPredicted RBP4.16□□□□□ -1.74
CLK1-208ENST00000464454 MFSD4BQ5TF39 518 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 GGNBP1Q5YKI7 109 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 HIST2H2BCQ6DN03 193 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 HIST2H2BDQ6DRA6 164 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 SIGIRRQ6IA17 410 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 NADSYN1Q6IA69 706 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 KIAA0930Q6ICG6 404 aaPredicted RBP4.16□□□□□ -1.74
CLK1-208ENST00000464454 ANKRD54Q6NXT1 300 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 PQLC2Q6ZP29 291 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 SEPT14Q6ZU15 432 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 CREB3L2Q70SY1 520 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 SPATA6LQ8N4H0 392 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 NUDCD2Q8WVJ2 157 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 IGSF8Q969P0 613 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 SAT2Q96F10 170 aaPredicted RBP4.16□□□□□ -1.74
CLK1-208ENST00000464454 RRNAD1Q96FB5 475 aaKnown RBP4.16□□□□□ -1.74
CLK1-208ENST00000464454 OR2A14Q96R47 310 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 SH3GL2Q99962 352 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 C6orf106Q9H6K1 298 aaPredicted RBP4.16□□□□□ -1.74
CLK1-208ENST00000464454 ESRP2Q9H6T0 727 aaKnown RBP4.16□□□□□ -1.74
CLK1-208ENST00000464454 SLC28A3Q9HAS3 691 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 ANKEF1Q9NU02 776 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 NKIRAS2Q9NYR9 191 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 OGFRQ9NZT2 677 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 POLG2Q9UHN1 485 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 RPS6KA6Q9UK32 745 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 NENFQ9UMX5 172 aa4.16□□□□□ -1.74
CLK1-208ENST00000464454 R3HDM2Q9Y2K5 976 aaKnown RBP4.16□□□□□ -1.74
CLK1-208ENST00000464454 GPC4O75487 556 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms