RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 EIF2B4Q9UI10 523 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 AGO1Q9UL18 857 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 PADI4Q9UM07 663 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 RP1L1Q8IWN7 2480 aaPredicted RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 HNRNPCL2B2RXH8 293 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 H3BSA7 217 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 RGS14O43566 566 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 RNASEH1O60930 286 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 NBNO60934 754 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 BEST1O76090 585 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 MFN2O95140 757 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 KCNH1O95259 989 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 FGF3P11487 239 aaPredicted RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 UGT1A6P19224 532 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 MSH3P20585 1137 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 HSPA7P48741 367 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 CCL23P55773 120 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 MTPNP58546 118 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 SMAD3P84022 425 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 ASRGL1Q7L266 308 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 CHST15Q7LFX5 561 aaPredicted RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 ZNF614Q8N883 585 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 OR7A2PQ8NGA2 310 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 OR10Q1Q8NGQ4 319 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 ACTRT2Q8TDY3 377 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 RRAGCQ9HB90 399 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.06□□□□□ -0.96
HPS4-208ENST00000464362 OXSMQ9NWU1 459 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 IGSF9Q9P2J2 1179 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 ARL5AQ9Y689 179 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 SMIM35A0A1B0GVV1 85 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 GOT2P00505 430 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 HLA-DQB2P05538 268 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 COX7A2P14406 83 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 RPL17P18621 184 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 RAP1GDS1P52306 607 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 DEFA1P59665 94 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 DEFA3P59666 94 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 NAA20P61599 178 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 MAP2K5Q13163 448 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 TUSC3Q13454 348 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 PPP1R3AQ16821 1122 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 TYW3Q6IPR3 259 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 ZCCHC8Q6NZY4 707 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 ZC3HC1Q86WB0 502 aaKnown RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 ARFGAP1Q8N6T3 406 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 OR2T12Q8NG77 320 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 FCRL3Q96P31 734 aaPredicted RBP9.06□□□□□ -0.96
HPS4-208ENST00000464362 ACAT2Q9BWD1 397 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 MIEF1Q9NQG6 463 aa9.06□□□□□ -0.96
HPS4-208ENST00000464362 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 ARL5CA6NH57 179 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 KPNA3O00505 521 aaPredicted RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 EI24O14681 340 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 FTH1P02794 183 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ALOX15P16050 662 aaPredicted RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 OR1D2P34982 312 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 RAB27AP51159 221 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ZNF132P52740 706 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CLCQ05315 142 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TNK2Q07912 1038 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ZNF284Q2VY69 593 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 PSMA8Q8TAA3 256 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 MAML3Q96JK9 1138 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ASB2Q96Q27 587 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CXorf21Q9HAI6 301 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ADGRE2Q9UHX3 823 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 DUSP12Q9UNI6 340 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 DMTF1Q9Y222 760 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 RBMX2Q9Y388 322 aaKnown RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 J3KR12 359 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CNOT3O75175 753 aaKnown RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 FESP07332 822 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 IDO1P14902 403 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ITPKAP23677 461 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 POLD2P49005 469 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ZNF135P52742 658 aaPredicted RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 LPIN1Q14693 890 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ARHGEF6Q15052 776 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TCEAL1Q15170 157 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CCL14Q16627 93 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TSTD2Q5T7W7 516 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 OGFOD2Q6N063 350 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 PPP4R4Q6NUP7 873 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 B3GNT9Q6UX72 402 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 CNTD1Q8N815 330 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.05□□□□□ -0.96
HPS4-208ENST00000464362 ZNF540Q8NDQ6 660 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TMEM159Q96B96 161 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 MTERF3Q96E29 417 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 C12orf42Q96LP6 360 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 APOLD1Q96LR9 279 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 KCNA7Q96RP8 456 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 ZDHHC6Q9H6R6 413 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 NWD2Q9ULI1 1742 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 MATN3O15232 486 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 URODP06132 367 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 IQCF3P0C7M6 154 aa9.05□□□□□ -0.96
HPS4-208ENST00000464362 PKMP14618 531 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms