RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 AFAP1L1Q8TED9 768 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 CCDC47Q96A33 483 aaKnown RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 ZC3HAV1LQ96H79 300 aaKnown RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 PYM1Q9BRP8 204 aaKnown RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 DESI2Q9BSY9 194 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 CCDC68Q9H2F9 335 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 PREBQ9HCU5 417 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 ZNF334Q9HCZ1 680 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 ORC3Q9UBD5 711 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-208ENST00000464001 POU2F3Q9UKI9 436 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 TMCC3Q9ULS5 477 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 GAB2Q9UQC2 676 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 A3GALT2U3KPV4 340 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 NOTCH3Q9UM47 2321 aa4.13□□□□□ -1.75
ITGB1-208ENST00000464001 A0A1W2PS18 150 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 CBY3A6NI87 242 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 ZNF587BE7ETH6 402 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 NDUFS7O75251 213 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 RFPL2O75678 378 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 SLC2A4P14672 509 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 MUTP22033 750 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 CASP6P55212 293 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 TRPC3Q13507 836 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 ANKRD1Q15327 319 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 EFNB3Q15768 340 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 PKN2Q16513 984 aaKnown RBP4.12□□□□□ -1.75
ITGB1-208ENST00000464001 ANKRD45Q5TZF3 282 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 IRAK1BP1Q5VVH5 260 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 FAM47EQ6ZV65 393 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 MOB3CQ70IA8 216 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 SATL1Q86VE3 508 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 GALNT13Q8IUC8 556 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 HERC6Q8IVU3 1022 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 CARNMT1Q8N4J0 409 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 CEP70Q8NHQ1 597 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 RFFLQ8WZ73 363 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 SNAPC3Q92966 411 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 ERGIC1Q969X5 290 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 ZUFSPQ96AP4 578 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 CCDC34Q96HJ3 373 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 BAG1Q99933 345 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-208ENST00000464001 SLF1Q9BQI6 1058 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 CLSTN3Q9BQT9 956 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.12□□□□□ -1.75
ITGB1-208ENST00000464001 MRPL9Q9BYD2 267 aaKnown RBP4.12□□□□□ -1.75
ITGB1-208ENST00000464001 AGXT2Q9BYV1 514 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 XPO4Q9C0E2 1151 aaKnown RBP4.12□□□□□ -1.75
ITGB1-208ENST00000464001 SLC32A1Q9H598 525 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 STN1Q9H668 368 aaKnown RBP4.12□□□□□ -1.75
ITGB1-208ENST00000464001 EPHX3Q9H6B9 360 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 DBNDD1Q9H9R9 158 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 LRRC4Q9HBW1 653 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 HAUS2Q9NVX0 235 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 ALKBH4Q9NXW9 302 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 FEM1BQ9UK73 627 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 ODF2LQ9ULJ1 636 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 ZNF711Q9Y462 761 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 NFE2L3Q9Y4A8 694 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 GPRASP1Q5JY77 1395 aa4.12□□□□□ -1.75
ITGB1-208ENST00000464001 A0A0U1RQF3 1178 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 SH2D7A6NKC9 451 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-208ENST00000464001 TTC36A6NLP5 189 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 HSPB2A8KAH6 182 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 H7C0S8 307 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 PEX12O00623 359 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 SOCS6O14544 535 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 PER2O15055 1255 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 SLC22A3O75751 556 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 HSPA4LO95757 839 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 STARD3NLO95772 234 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 APOA4P06727 396 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 CDKN1AP38936 164 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 VEGFCP49767 419 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 FUT6P51993 359 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 BRWD1-AS2P59051 145 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 TLE2Q04725 743 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 TBL3Q12788 808 aaKnown RBP4.11□□□□□ -1.75
ITGB1-208ENST00000464001 HSPB2Q16082 182 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 SLC9C2Q5TAH2 1124 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 WDR73Q6P4I2 378 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 MFSD6Q6ZSS7 791 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 VSIG1Q86XK7 387 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 METTL27Q8N6F8 245 aaPredicted RBP4.11□□□□□ -1.75
ITGB1-208ENST00000464001 KBTBD3Q8NAB2 608 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 USP38Q8NB14 1042 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 SPPL3Q8TCT6 385 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 MAGEC3Q8TD91 643 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 KXD1Q9BQD3 176 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 PAIP1Q9H074 479 aaKnown RBP4.11□□□□□ -1.75
ITGB1-208ENST00000464001 C17orf75Q9HAS0 396 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 FBRSL1Q9HCM7 1045 aaKnown RBP4.11□□□□□ -1.75
ITGB1-208ENST00000464001 ZFP57Q9NU63 452 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 CISD1Q9NZ45 108 aaKnown RBP4.11□□□□□ -1.75
ITGB1-208ENST00000464001 KCNS2Q9ULS6 477 aa4.11□□□□□ -1.75
ITGB1-208ENST00000464001 PI4KAP2A4QPH2 592 aa4.1□□□□□ -1.75
ITGB1-208ENST00000464001 FAM90A7PA6NKC0 464 aa4.1□□□□□ -1.75
ITGB1-208ENST00000464001 FAM90A22PA8MWA6 464 aa4.1□□□□□ -1.75
ITGB1-208ENST00000464001 FAM90A12PA8MX19 464 aa4.1□□□□□ -1.75
ITGB1-208ENST00000464001 FAM90A23PA8MXZ1 464 aa4.1□□□□□ -1.75
ITGB1-208ENST00000464001 PLRG1O43660 514 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms