RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TMEM98Q9Y2Y6 226 aa18.8■□□□□ 0.6
SF3A1-205ENST00000463818 FASNP49327 2511 aaKnown RBP18.8■□□□□ 0.6
SF3A1-205ENST00000463818 ATXN7O15265 892 aaPredicted RBP18.79■□□□□ 0.6
SF3A1-205ENST00000463818 B4GAT1O43505 415 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 NUDT21O43809 227 aaKnown RBP18.79■□□□□ 0.6
SF3A1-205ENST00000463818 JCHAINP01591 159 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 HLA-DQB2P05538 268 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 IVLP07476 585 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 ZNF30P17039 623 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 UGT1A5P35504 534 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 UCNP55089 124 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 MAZP56270 477 aaKnown RBP18.79■□□□□ 0.6
SF3A1-205ENST00000463818 TMPRSS3P57727 454 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 B4GALNT1Q00973 533 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 CTBSQ01459 385 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 EIF3IQ13347 325 aaKnown RBP18.79■□□□□ 0.6
SF3A1-205ENST00000463818 ARHGAP40Q5TG30 622 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 DOK6Q6PKX4 331 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 ADAMTSL4Q6UY14 1074 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 SPRED1Q7Z699 444 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 CLEC14AQ86T13 490 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 C17orf82Q86X59 251 aaPredicted RBP18.79■□□□□ 0.6
SF3A1-205ENST00000463818 CCDC13Q8IYE1 715 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 SLC39A7Q92504 469 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 AGAP2Q99490 1192 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 ST14Q9Y5Y6 855 aa18.79■□□□□ 0.6
SF3A1-205ENST00000463818 ANKRD36A6QL64 1941 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 CLDN7O95471 211 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 SOD1P00441 154 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 ITGA2BP08514 1039 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 HGFP14210 728 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 CCKBRP32239 447 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 ADCY8P40145 1251 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 STC1P52823 247 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 ZFP36L1Q07352 338 aaKnown RBP18.78■□□□□ 0.6
SF3A1-205ENST00000463818 SLC30A9Q6PML9 568 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 VSTM4Q8IW00 320 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 NRSN1Q8IZ57 195 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 SCARF2Q96GP6 870 aaPredicted RBP18.78■□□□□ 0.6
SF3A1-205ENST00000463818 RIOK2Q9BVS4 552 aaKnown RBP18.78■□□□□ 0.6
SF3A1-205ENST00000463818 TDRD1Q9BXT4 1180 aaKnown RBP18.78■□□□□ 0.6
SF3A1-205ENST00000463818 PCDH9Q9HC56 1237 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 SSUH2Q9Y2M2 353 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 PLEKHM1Q9Y4G2 1056 aa18.78■□□□□ 0.6
SF3A1-205ENST00000463818 COL27A1Q8IZC6 1860 aaPredicted RBP18.77■□□□□ 0.6
SF3A1-205ENST00000463818 LRRD1A4D1F6 860 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 RHPN2P1A8MT19 583 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 TK2O00142 265 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 AGRPO00253 132 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 ECEL1O95672 775 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 PRB1P04280 392 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 TPM1P09493 284 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 CA4P22748 312 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 OR1D5P58170 312 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 RPL26P61254 145 aaKnown RBP18.77■□□□□ 0.6
SF3A1-205ENST00000463818 ZNF765Q7L2R6 523 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 TRIM74Q86UV6 250 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 LSM14AQ8ND56 463 aaKnown RBP18.77■□□□□ 0.6
SF3A1-205ENST00000463818 LPCAT1Q8NF37 534 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 HDAC11Q96DB2 347 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 CCDC42Q96M95 316 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 ZNF830Q96NB3 372 aaPredicted RBP18.77■□□□□ 0.6
SF3A1-205ENST00000463818 NHEJ1Q9H9Q4 299 aaPredicted RBP18.77■□□□□ 0.6
SF3A1-205ENST00000463818 ABHD10Q9NUJ1 306 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 SPTLC3Q9NUV7 552 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 DNPEPQ9ULA0 475 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 RPL26L1Q9UNX3 145 aaKnown RBP18.77■□□□□ 0.6
SF3A1-205ENST00000463818 PCDHGA7Q9Y5G6 932 aa18.77■□□□□ 0.6
SF3A1-205ENST00000463818 CAPN8A6NHC0 703 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 KCNK1O00180 336 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 PYGLP06737 847 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 MMP2P08253 660 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 JMJD7P0C870 316 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 ALDH4A1P30038 563 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 SLC5A2P31639 672 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 ARHGAP25P42331 645 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 AMZ1Q400G9 498 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 FAM182AQ5T1J6 154 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 USP53Q70EK8 1073 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 MARK2Q7KZI7 788 aaKnown RBP18.76■□□□□ 0.59
SF3A1-205ENST00000463818 TMPRSS9Q7Z410 1059 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 JAMLQ86YT9 394 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 PLD5Q8N7P1 536 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 CNTD1Q8N815 330 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 EXD1Q8NHP7 514 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 PATE1Q8WXA2 126 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 MAK16Q9BXY0 300 aaKnown RBP18.76■□□□□ 0.59
SF3A1-205ENST00000463818 LOXL2Q9Y4K0 774 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 HEY1Q9Y5J3 304 aa18.76■□□□□ 0.59
SF3A1-205ENST00000463818 SMG1Q96Q15 3661 aaKnown RBP18.76■□□□□ 0.59
SF3A1-205ENST00000463818 LOC400499M0QZD8 3231 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 LRP4O75096 1905 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 C3orf70A6NLC5 250 aaPredicted RBP18.75■□□□□ 0.59
SF3A1-205ENST00000463818 ZNF487B1APH4 448 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 INPP4BO15327 924 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 ACTR1BP42025 376 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 CD86P42081 329 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 ACTR1AP61163 376 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 PPIDQ08752 370 aaKnown RBP18.75■□□□□ 0.59
SF3A1-205ENST00000463818 VAC14Q08AM6 782 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms