RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TEAD1P28347 426 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 STAT5AP42229 794 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 ZNF143P52747 638 aaPredicted RBP14.41□□□□□ -0.1
SMC1A-204ENST00000463684 GSCP56915 257 aaPredicted RBP14.41□□□□□ -0.1
SMC1A-204ENST00000463684 LZTR1Q8N653 840 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 MLKLQ8NB16 471 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 C3orf20Q8ND61 904 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 SH3KBP1Q96B97 665 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 OR2M4Q96R27 311 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 STN1Q9H668 368 aaKnown RBP14.41□□□□□ -0.1
SMC1A-204ENST00000463684 APMAPQ9HDC9 416 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 MRPS18BQ9Y676 258 aaKnown RBP14.41□□□□□ -0.1
SMC1A-204ENST00000463684 RPS6KL1Q9Y6S9 549 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 TTLL8A6PVC2 850 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 K7EM74 188 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 DFFAO00273 331 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 MAP3K6O95382 1288 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 DLGAP3O95886 979 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 UNGP13051 313 aaPredicted RBP14.4□□□□□ -0.1
SMC1A-204ENST00000463684 GPR1P46091 355 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 HHEXQ03014 270 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 IL10RBQ08334 325 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 PTP4A2Q12974 167 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 MAP7Q14244 749 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 ERV3-1Q14264 604 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 HSP90AA4PQ58FG1 418 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 Q6ZVL8 140 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 HSD11B1LQ7Z5J1 315 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 SFRP1Q8N474 314 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 GALNT11Q8NCW6 608 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 SLC37A2Q8TED4 501 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 SSC4DQ8WTU2 575 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 SCARF2Q96GP6 870 aaPredicted RBP14.4□□□□□ -0.1
SMC1A-204ENST00000463684 PHTF1Q9UMS5 762 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 POLHQ9Y253 713 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 TMEM98Q9Y2Y6 226 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 PCDHGC4Q9Y5F7 938 aa14.4□□□□□ -0.1
SMC1A-204ENST00000463684 PSMD11O00231 422 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 EEF2KO00418 725 aaKnown RBP14.39□□□□□ -0.11
SMC1A-204ENST00000463684 INPP4BO15327 924 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 RFPL1O75677 317 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 CPP00450 1065 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 GNLYP22749 145 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 DLSTP36957 453 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 MAPK9P45984 424 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 UQCRFS1P47985 274 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 NFATC2Q13469 925 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 LRP8Q14114 963 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 LBRQ14739 615 aaKnown RBP14.39□□□□□ -0.11
SMC1A-204ENST00000463684 CAMK4Q16566 473 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 PYCR3Q53H96 274 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.39□□□□□ -0.11
SMC1A-204ENST00000463684 CAPRIN2Q6IMN6 1127 aaKnown RBP14.39□□□□□ -0.11
SMC1A-204ENST00000463684 DNAJC24Q6P3W2 148 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 C6orf15Q6UXA7 325 aaPredicted RBP14.39□□□□□ -0.11
SMC1A-204ENST00000463684 MARK2Q7KZI7 788 aaKnown RBP14.39□□□□□ -0.11
SMC1A-204ENST00000463684 GALNT13Q8IUC8 556 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 CBARPQ8N350 705 aaPredicted RBP14.39□□□□□ -0.11
SMC1A-204ENST00000463684 SPOCK2Q92563 424 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 MCEEQ96PE7 176 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 PSKH2Q96QS6 385 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 CNPY3Q9BT09 278 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 ULBP3Q9BZM4 244 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 VPS16Q9H269 839 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 KLHL3Q9UH77 587 aa14.39□□□□□ -0.11
SMC1A-204ENST00000463684 TTC24A2A3L6 582 aaPredicted RBP14.38□□□□□ -0.11
SMC1A-204ENST00000463684 HTRA2O43464 458 aaPredicted RBP14.38□□□□□ -0.11
SMC1A-204ENST00000463684 SOCS5O75159 536 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 GADD45BO75293 160 aaPredicted RBP14.38□□□□□ -0.11
SMC1A-204ENST00000463684 KATNA1O75449 491 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 F8A1P23610 371 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 SOX5P35711 763 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 DPTQ07507 201 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 FOXM1Q08050 763 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 SYCP1Q15431 976 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 ARHGAP36Q6ZRI8 547 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 PHF13Q86YI8 300 aaPredicted RBP14.38□□□□□ -0.11
SMC1A-204ENST00000463684 CPT1CQ8TCG5 803 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 NSMCE3Q96MG7 304 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 PCDHB18PQ96TA0 734 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.38□□□□□ -0.11
SMC1A-204ENST00000463684 SARS2Q9NP81 518 aaKnown RBP14.38□□□□□ -0.11
SMC1A-204ENST00000463684 GPATCH2LQ9NWQ4 482 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 ZNHIT2Q9UHR6 403 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 KCND3Q9UK17 655 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 CROTQ9UKG9 612 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 TLK1Q9UKI8 766 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 AP4E1Q9UPM8 1137 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 NBASA2RRP1 2371 aa14.38□□□□□ -0.11
SMC1A-204ENST00000463684 MYO9AB2RTY4 2548 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 NBPF19A0A087WUL8 3843 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 EIF3CLB5ME19 914 aaKnown RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 ASMTLO95671 621 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 LHCGRP22888 699 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 EPHA4P54764 986 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 POLR2FP61218 127 aaKnown RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 RPL7AP62424 266 aaKnown RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 SLC10A7Q0GE19 358 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 ZNF235Q14590 738 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 CLEC16AQ2KHT3 1053 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms