RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 A0A0U1RQS6 177 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 STX7O15400 261 aaKnown RBP19.73■□□□□ 0.75
COL9A3-204ENST00000463487 HOXC4P09017 264 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-204ENST00000463487 LPOP22079 712 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-204ENST00000463487 HOXD11P31277 338 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-204ENST00000463487 TRIM23P36406 574 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 BLKP51451 505 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 KIAA1024LP59773 190 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 BNC1Q01954 994 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 TUBB2AQ13885 445 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 NFATC4Q14934 902 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 TRIP13Q15645 432 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-204ENST00000463487 STPG1Q5TH74 334 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 PDPK2PQ6A1A2 396 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 KLHL7Q8IXQ5 586 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 PLEKHG4BQ96PX9 1271 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 ZSCAN5AQ9BUG6 496 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 TUBB2BQ9BVA1 445 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 RIOK2Q9BVS4 552 aaKnown RBP19.73■□□□□ 0.75
COL9A3-204ENST00000463487 OR1A2Q9Y585 309 aa19.73■□□□□ 0.75
COL9A3-204ENST00000463487 URI1O94763 535 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-204ENST00000463487 MYCLP1P12525 358 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-204ENST00000463487 TPSB2P20231 275 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 HADHAP40939 763 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 HNRNPKP61978 463 aaKnown RBP eCLIP19.72■□□□□ 0.75
COL9A3-204ENST00000463487 OLIG2Q13516 323 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 TPSAB1Q15661 275 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 HENMT1Q5T8I9 393 aaKnown RBP19.72■□□□□ 0.75
COL9A3-204ENST00000463487 DENND5AQ6IQ26 1287 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 ADAMTSL4Q6UY14 1074 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 HEATR4Q86WZ0 1026 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 SPATS2Q86XZ4 545 aaKnown RBP19.72■□□□□ 0.75
COL9A3-204ENST00000463487 SLC22A18ASQ8N1D0 253 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 PLA2G15Q8NCC3 412 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 KIF18AQ8NI77 898 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 BTN2A2Q8WVV5 523 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 SCAMP4Q969E2 229 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 WDR92Q96MX6 357 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 C19orf43Q9BQ61 176 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 SPATA16Q9BXB7 569 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 TM7SF3Q9NS93 570 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 DNAJC28Q9NX36 388 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 ASIC3Q9UHC3 531 aa19.72■□□□□ 0.75
COL9A3-204ENST00000463487 ADAMTS9Q9P2N4 1935 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 A0A1B0GTQ1 180 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 C4orf47A7E2U8 309 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 CDX4O14627 284 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-204ENST00000463487 GDF9O60383 454 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 SPAM1P38567 509 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 RXRGP48443 463 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 DR1Q01658 176 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 SEPT6Q14141 434 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 DHX34Q14147 1143 aaKnown RBP19.71■□□□□ 0.75
COL9A3-204ENST00000463487 UAP1L1Q3KQV9 507 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 ALS2CLQ60I27 953 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 TTC30BQ8N4P2 665 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 TRAM1L1Q8N609 369 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 OR52K1Q8NGK4 314 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 TEX101Q9BY14 249 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 RXFP3Q9NSD7 469 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 IL17CQ9P0M4 197 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 KLQ9UEF7 1012 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 CDC23Q9UJX2 597 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 PCDHGB2Q9Y5G2 931 aa19.71■□□□□ 0.75
COL9A3-204ENST00000463487 GVINP1Q7Z2Y8 2422 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 AURKAO14965 403 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 BPIP17213 487 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 ADCY8P40145 1251 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 CDK3Q00526 305 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 PPARDQ03181 441 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 PTK6Q13882 451 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 FZD2Q14332 565 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 POU6F1Q14863 301 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 ENPP7Q6UWV6 458 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 PCGF5Q86SE9 256 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 OR56A4Q8NGH8 313 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 OR2I1PQ8NGU4 316 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 FUBP1Q96AE4 644 aaKnown RBP19.7■□□□□ 0.74
COL9A3-204ENST00000463487 EID2BQ96D98 161 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 HIC2Q96JB3 615 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 SLC13A1Q9BZW2 595 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 BPIFA1Q9NP55 256 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 CASS4Q9NQ75 786 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 APPL1Q9UKG1 709 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 FNDC3AQ9Y2H6 1198 aaKnown RBP19.7■□□□□ 0.74
COL9A3-204ENST00000463487 ARL5AQ9Y689 179 aa19.7■□□□□ 0.74
COL9A3-204ENST00000463487 TP53BP1Q12888 1972 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-204ENST00000463487 HEATR9A2RTY3 570 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 K7ESM1 405 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 NDC80O14777 642 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 TNFRSF10CO14798 259 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 PCDHGA12O60330 932 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 RASGRP1O95267 797 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 CSF2P04141 144 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 NME1P15531 152 aaKnown RBP19.69■□□□□ 0.74
COL9A3-204ENST00000463487 ITGA9Q13797 1035 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 WHAMMP3Q1A5X7 153 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 RFLNAQ6ZTI6 216 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 NLRP9Q7RTR0 991 aa19.69■□□□□ 0.74
COL9A3-204ENST00000463487 MAATS1Q7Z4T9 603 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms