RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SLC17A4Q9Y2C5 497 aa15.64■□□□□ 0.09
SND1-203ENST00000463020 MRPS18BQ9Y676 258 aaKnown RBP15.64■□□□□ 0.09
SND1-203ENST00000463020 NOTCH2Q04721 2471 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 A8MU76 341 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 EEF2KO00418 725 aaKnown RBP15.63■□□□□ 0.09
SND1-203ENST00000463020 ATMINO43313 823 aaPredicted RBP15.63■□□□□ 0.09
SND1-203ENST00000463020 ERCC2P18074 760 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 CCR10P46092 362 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 TRAF2Q12933 501 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 KRT31Q15323 416 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 TRIM72Q6ZMU5 477 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 Q6ZVL8 140 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 RTP4Q96DX8 246 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 PSMG3-AS1Q96PY0 264 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 SNRNP25Q9BV90 132 aaKnown RBP15.63■□□□□ 0.09
SND1-203ENST00000463020 DHX35Q9H5Z1 703 aaKnown RBP15.63■□□□□ 0.09
SND1-203ENST00000463020 TRNAU1APQ9NX07 287 aaKnown RBP15.63■□□□□ 0.09
SND1-203ENST00000463020 KCNK4Q9NYG8 393 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 AKAP7Q9P0M2 348 aaPredicted RBP15.63■□□□□ 0.09
SND1-203ENST00000463020 DACH1Q9UI36 760 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 CD84Q9UIB8 345 aa15.63■□□□□ 0.09
SND1-203ENST00000463020 ARHGAP42A6NI28 874 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 ZNF891A8MT65 544 aaPredicted RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 HTRA2O43464 458 aaPredicted RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 CALB1P05937 261 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 F8A1P23610 371 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 ERCC5P28715 1186 aaPredicted RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 VIPR1P32241 457 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 CSTF2P33240 577 aaKnown RBP eCLIP15.62■□□□□ 0.09
SND1-203ENST00000463020 ACTR1BP42025 376 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 GPR3P46089 330 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 TERF1P54274 439 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 ACTR1AP61163 376 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 CDC20Q12834 499 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 SQSTM1Q13501 440 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 TRA2AQ13595 282 aaKnown RBP eCLIP15.62■□□□□ 0.09
SND1-203ENST00000463020 TSR1Q2NL82 804 aaKnown RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 DEFB109BQ30KR1 87 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 SNAP47Q5SQN1 464 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 RFX8Q6ZV50 586 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 MARK2Q7KZI7 788 aaKnown RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 NRSN1Q8IZ57 195 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 C9orf43Q8TAL5 461 aaPredicted RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 SLC37A2Q8TED4 501 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 PDCD6IPQ8WUM4 868 aaKnown RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 ABHD17AQ96GS6 310 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 SLC45A3Q96JT2 553 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 PSKH2Q96QS6 385 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 AGAP2Q99490 1192 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 SP110Q9HB58 689 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 NOD2Q9HC29 1040 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 PHPT1Q9NRX4 125 aaPredicted RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 SEPT11Q9NVA2 429 aaKnown RBP15.62■□□□□ 0.09
SND1-203ENST00000463020 ETNK2Q9NVF9 386 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 PCSK1NQ9UHG2 260 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 TUBD1Q9UJT1 453 aa15.62■□□□□ 0.09
SND1-203ENST00000463020 MYO9AB2RTY4 2548 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 GOLGA6CA6NDK9 693 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 GOLGA6BA6NDN3 693 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 B4E171 279 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 MAP3K6O95382 1288 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 IVLP07476 585 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 GOLGA6DP0CG33 693 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 CTPS1P17812 591 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 EEF1GP26641 437 aaKnown RBP15.61■□□□□ 0.09
SND1-203ENST00000463020 TSPAN7P41732 249 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 MAXP61244 160 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 IL10RBQ08334 325 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 NSUN2Q08J23 767 aaKnown RBP eCLIP15.61■□□□□ 0.09
SND1-203ENST00000463020 IHHQ14623 411 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 LBRQ14739 615 aaKnown RBP15.61■□□□□ 0.09
SND1-203ENST00000463020 CLPPQ16740 277 aaPredicted RBP15.61■□□□□ 0.09
SND1-203ENST00000463020 CDKAL1Q5VV42 579 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 RAET1GQ6H3X3 334 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 TECPR1Q7Z6L1 1165 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 SCARF2Q96GP6 870 aaPredicted RBP15.61■□□□□ 0.09
SND1-203ENST00000463020 ZNF830Q96NB3 372 aaPredicted RBP15.61■□□□□ 0.09
SND1-203ENST00000463020 GOLGA6AQ9NYA3 693 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 PDP2Q9P2J9 529 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 SEPT3Q9UH03 358 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 PRKAB1Q9Y478 270 aa15.61■□□□□ 0.09
SND1-203ENST00000463020 BLACEA4D250 179 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 MTSS1O43312 755 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 CPP00450 1065 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 TPM2P07951 284 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 FURINP09958 794 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 TCF4P15884 667 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 AIF1P55008 147 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 AP1S1P61966 158 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 DPYSQ14117 519 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 PYCR3Q53H96 274 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.6■□□□□ 0.09
SND1-203ENST00000463020 DCAF12Q5T6F0 453 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 TMEM71Q6P5X7 295 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 ARHGAP22Q7Z5H3 698 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 MCOLN2Q8IZK6 566 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 PAF1Q8N7H5 531 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 SPOCK2Q92563 424 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 SCAMP4Q969E2 229 aa15.6■□□□□ 0.09
SND1-203ENST00000463020 MIB2Q96AX9 1013 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms