RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 CNGB3Q9NQW8 809 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 PNPOQ9NVS9 261 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 FEZ2Q9UHY8 353 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 INSL6Q9Y581 213 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 V9GYY5 206 aaPredicted RBP7.55□□□□□ -1.2
UBE4B-204ENST00000462658 PRUNE2Q8WUY3 3088 aa7.55□□□□□ -1.2
UBE4B-204ENST00000462658 FNDC1Q4ZHG4 1894 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 MTMR11A4FU01 709 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 B3GALT2O43825 422 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 HSF2BPO75031 334 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 SLC43A1O75387 559 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 DAB1O75553 588 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 AGFG2O95081 481 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 TRUB2O95900 331 aaKnown RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 KRT7P08729 469 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 NR4A1P22736 598 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 IL1R2P27930 398 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 MIPP30301 263 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 OR1D2P34982 312 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 PPM1AP35813 382 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 CETN2P41208 172 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 MATKP42679 507 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 MAGEA11P43364 429 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 PTPN9P43378 593 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 NKX6-1P78426 367 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 KRT17Q04695 432 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 C2orf54Q08AI8 447 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 FOXE3Q13461 319 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 PSMD5Q16401 504 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 CDO1Q16878 200 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 C15orf59Q2T9L4 293 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 ODF2Q5BJF6 829 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 PM20D1Q6GTS8 502 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 FAM109BQ6ICB4 259 aaPredicted RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 SLC8B1Q6J4K2 584 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 FAM90A1Q86YD7 464 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 HERC6Q8IVU3 1022 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 RCOR2Q8IZ40 523 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 DEFB106AQ8N104 65 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 SCML4Q8N228 414 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 MMGT1Q8N4V1 131 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 CELF5Q8N6W0 485 aaKnown RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 NOA1Q8NC60 698 aaKnown RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 EXD1Q8NHP7 514 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 PHOSPHO2Q8TCD6 241 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 SPPL2BQ8TCT7 592 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 C2orf15Q8WU43 125 aaKnown RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 FAM172AQ8WUF8 416 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 IRGQQ8WZA9 623 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 ZNF503Q96F45 646 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 SLC35A4Q96G79 324 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 RBM41Q96IZ5 413 aaKnown RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 RAD9AQ99638 391 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 HERC2P3Q9BVR0 1158 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 AP1M1Q9BXS5 423 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 MTIF3Q9H2K0 278 aaKnown RBP7.54□□□□□ -1.2
UBE4B-204ENST00000462658 ZWILCHQ9H900 591 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 POPDC2Q9HBU9 364 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 KLHL11Q9NVR0 708 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 JKAMPQ9P055 326 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 MTRRQ9UBK8 725 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 PCSK1NQ9UHG2 260 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 CDY1Q9Y6F8 540 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 COL4A6Q14031 1691 aa7.54□□□□□ -1.2
UBE4B-204ENST00000462658 TSC2P49815 1807 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 A6NNZ2 444 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 YJEFN3A6XGL0 299 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 E7ENQ6 273 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 PI4K2BG5E9Z4 385 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 DYNC1I1O14576 645 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 CAPN9O14815 690 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 ADAM12O43184 909 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 PRPSAP2O60256 369 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 NCR1O76036 304 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 FGF18O76093 207 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 AHSGP02765 367 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 URODP06132 367 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 RHOXF2BP0C7M4 288 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 HAPLN1P10915 354 aaPredicted RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 RPL17P18621 184 aaKnown RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 GCSHP23434 173 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 ZFP36P26651 326 aaKnown RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 GLUD2P49448 558 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SULT1E1P49888 294 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SLC25A11Q02978 314 aaKnown RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 PUM1Q14671 1186 aaKnown RBP eCLIP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SMC1AQ14683 1233 aaKnown RBP7.53□□□□□ -1.2
UBE4B-204ENST00000462658 LLGL1Q15334 1064 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SHHQ15465 462 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 ELF2Q15723 593 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 GFOD2Q3B7J2 385 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SLC25A52Q3SY17 297 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 MGAT5BQ3V5L5 792 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 RAB6CQ53S08 254 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 DCAF6Q58WW2 860 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SDHAF4Q5VUM1 108 aa7.53□□□□□ -1.2
UBE4B-204ENST00000462658 SYPL2Q5VXT5 272 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms