RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 BRD8Q9H0E9 1235 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 CDH19Q9H159 772 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 ABCG8Q9H221 673 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 RALYQ9UKM9 306 aaKnown RBP10.14□□□□□ -0.79
SF3A3-204ENST00000462258 SUFUQ9UMX1 484 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 LHX6Q9UPM6 363 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 SLC17A4Q9Y2C5 497 aa10.14□□□□□ -0.79
SF3A3-204ENST00000462258 ZNF106Q9H2Y7 1883 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 NBEAQ8NFP9 2946 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 hCG_1818297A0A087WSY0 165 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 A0A087WV48 116 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 D6RAR5 112 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 CASC3O15234 703 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 NOBOXO60393 691 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 CST8O60676 142 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 CLDN7O95471 211 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 SLC4A1P02730 911 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 MPOP05164 745 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 PTPN3P26045 913 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 NR2C2P49116 596 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 PRKD1Q15139 912 aaPredicted RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 LLGL1Q15334 1064 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 SLC14A2Q15849 920 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 PCSK7Q16549 785 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 ISXQ2M1V0 245 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 COL28A1Q2UY09 1125 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 TBC1D25Q3MII6 688 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 C14orf28Q4W4Y0 310 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 TFDP3Q5H9I0 405 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 C3orf38Q5JPI3 329 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 FAM182AQ5T1J6 154 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 CERCAMQ5T4B2 595 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 C19orf48Q6RUI8 117 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 B4GALNT4Q76KP1 1039 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 BZW1Q7L1Q6 419 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 DAAM2Q86T65 1068 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 TRIM74Q86UV6 250 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 NT5DC3Q86UY8 548 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 TMTC1Q8IUR5 882 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 SFTPA2Q8IWL1 248 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 RAVER1Q8IY67 606 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 NRSN1Q8IZ57 195 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 FAM46DQ8NEK8 389 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 SNIP1Q8TAD8 396 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 KIAA1524Q8TCG1 905 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 GPBAR1Q8TDU6 330 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 PTCD2Q8WV60 388 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 TFB1MQ8WVM0 346 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 KRT35Q92764 455 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 HAUS1Q96CS2 278 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 RBM41Q96IZ5 413 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 TRIB3Q96RU7 358 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 AGAP2Q99490 1192 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 MLPHQ9BV36 600 aaPredicted RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 RIOK2Q9BVS4 552 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 GSDMCQ9BYG8 508 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 DPEP2Q9H4A9 486 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 TRNAU1APQ9NX07 287 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 PKD2L2Q9NZM6 624 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 SAE1Q9UBE0 346 aaPredicted RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 RABGEF1Q9UJ41 708 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 ENTPD2Q9Y5L3 495 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 KIF26BQ2KJY2 2108 aa10.13□□□□□ -0.79
SF3A3-204ENST00000462258 URB1O60287 2271 aaKnown RBP10.13□□□□□ -0.79
SF3A3-204ENST00000462258 ANKRD66B4E2M5 251 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 NTN3O00634 580 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 INPP4BO15327 924 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 RPLP0P05388 317 aaKnown RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 IVLP07476 585 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 AK4P27144 223 aaPredicted RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 ACTN2P35609 894 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 ABCG1P45844 678 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 POLD2P49005 469 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 SPINT3P49223 89 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 ADCY2Q08462 1091 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 HLTFQ14527 1009 aaKnown RBP eCLIP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 PPP2R5EQ16537 467 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 TEX44Q53QW1 395 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 HENMT1Q5T8I9 393 aaKnown RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 SLC30A9Q6PML9 568 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 MARK2Q7KZI7 788 aaKnown RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 LYSMD3Q7Z3D4 306 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 GAS2L3Q86XJ1 694 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 CCNJLQ8IV13 435 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 ACRBPQ8NEB7 543 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 EXD1Q8NHP7 514 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 CCHCR1Q8TD31 782 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 HNRNPLLQ8WVV9 542 aaKnown RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 P3H4Q92791 437 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 GRAMD1AQ96CP6 724 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 ATXN7L3BQ96GX2 97 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 COX14Q96I36 57 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 HIC2Q96JB3 615 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 QKIQ96PU8 341 aaKnown RBP eCLIP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 OR2M4Q96R27 311 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 GFM1Q96RP9 751 aaKnown RBP10.12□□□□□ -0.79
SF3A3-204ENST00000462258 SLC25A51Q9H1U9 297 aa10.12□□□□□ -0.79
SF3A3-204ENST00000462258 POLR1BQ9H9Y6 1135 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms