RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 CSNK1DP48730 415 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 NEK3P51956 506 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 STC1P52823 247 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PLK1P53350 603 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 NAGLUP54802 743 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ATP6V0D1P61421 351 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SEMG2Q02383 582 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ELP6Q0PNE2 266 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 RPS6KA2Q15349 733 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SETMARQ53H47 684 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 LRRC73Q5JTD7 316 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 C6orf163Q5TEZ5 329 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 LRRC8EQ6NSJ5 796 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TRPM8Q7Z2W7 1104 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM217AQ8IXS0 508 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 RAB3IL1Q8TBN0 382 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ADAMTS19Q8TE59 1207 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CXorf40AQ8TE69 158 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 LRIG1Q96JA1 1093 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MECRQ9BV79 373 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM83DQ9H4H8 585 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ALG9Q9H6U8 611 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ECT2Q9H8V3 914 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TREX1Q9NSU2 369 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MKS1Q9NXB0 559 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TMEM216Q9P0N5 145 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 B4GALT6Q9UBX8 382 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 IL36AQ9UHA7 158 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ZFP69BQ9UJL9 534 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 FRMPD3Q5JV73 1810 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CEP350Q5VT06 3117 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 HOXC11O43248 304 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 LDB2O43679 373 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 KAT7O95251 611 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MMP2P08253 660 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 HIST1H2AGP0C0S8 130 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 NCF2P19878 526 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CR2P20023 1033 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 HIST1H2ADP20671 130 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 FOXN2P32314 431 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SLC1A6P48664 564 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TSTA3Q13630 321 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CAMK1Q14012 370 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF460Q14592 562 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 GPR33Q49SQ1 333 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TNFAIP8L3Q5GJ75 292 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PRSS36Q5K4E3 855 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 RBM20Q5T481 1227 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PIWIL4Q7Z3Z4 852 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SNX20Q7Z614 316 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SERPINA9Q86WD7 417 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 C10orf107Q8IVU9 208 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ADGRG2Q8IZP9 1017 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PGBD3Q8N328 593 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SPATA6LQ8N4H0 392 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TERB1Q8NA31 727 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 STAG3L4Q8TBR4 150 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MCUR1Q96AQ8 359 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 NXNL1Q96CM4 212 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 KLHL29Q96CT2 875 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ERP27Q96DN0 273 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ERLEC1Q96DZ1 483 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 HIST1H2AHQ96KK5 128 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 HIST1H2AJQ99878 128 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 H2AFJQ9BTM1 129 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TUBB6Q9BUF5 446 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 OBP2AQ9NY56 170 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 EURLQ9NYK6 297 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MARK1Q9P0L2 795 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MARCH4Q9P2E8 410 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 COPG2Q9UBF2 871 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 GGT7Q9UJ14 662 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MOSPD1Q9UJG1 213 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CLEC4EQ9ULY5 219 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 STARD13Q9Y3M8 1113 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 F5P12259 2224 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 TTC34A8MYJ7 566 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 LEFTY1O75610 366 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 KLHL2O95198 593 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 CLDN7O95471 211 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 HLA-EP13747 358 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF30P17039 623 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 DGKAP23743 735 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 MAP4P27816 1152 aaKnown RBP4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 VIPR1P32241 457 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 HNF1BP35680 557 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 HMGCLP35914 325 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 LEPRP48357 1165 aaKnown RBP4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 LIG3P49916 1009 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 STX1BP61266 288 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 TNK2Q07912 1038 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 PRKAA1Q13131 559 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 BOP1Q14137 746 aaKnown RBP4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 ELAVL3Q14576 367 aaKnown RBP4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 CHRNA6Q15825 494 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 TTC31Q49AM3 519 aaPredicted RBP4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF805Q5CZA5 627 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 DGKKQ5KSL6 1271 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 LIPMQ5VYY2 423 aa4.1□□□□□ -1.75
ATP13A3-206ENST00000461660 LRRC66Q68CR7 880 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms