RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PTGR1Q14914 329 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 PCLAFQ15004 111 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 PNLIPRP3Q17RR3 467 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 TMEM266Q2M3C6 531 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CDONQ4KMG0 1287 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 MTX3Q5HYI7 312 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF626Q68DY1 528 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 KIAA0930Q6ICG6 404 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 PDXDC1Q6P996 788 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 KCTD18Q6PI47 426 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SLC2A7Q6PXP3 512 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CRELD2Q6UXH1 353 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 MTSS1LQ765P7 747 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 PIP4P1Q86T03 277 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 DSELQ8IZU8 1212 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 MINDY1Q8N5J2 469 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 AADATQ8N5Z0 425 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 NANOGP1Q8N7R0 232 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SYT2Q8N9I0 419 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CCDC191Q8NCU4 936 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 C7orf57Q8NEG2 295 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 APPL2Q8NEU8 664 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GSDMBQ8TAX9 411 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 ADAMTS14Q8WXS8 1223 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 DNAAF4Q8WXU2 420 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF622Q969S3 477 aaKnown RBP eCLIP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 LRRC59Q96AG4 307 aaKnown RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SLC22A18Q96BI1 424 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CNDP2Q96KP4 475 aaKnown RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CEP295NLQ96MC4 621 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 LRFN5Q96NI6 719 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 DACH2Q96NX9 599 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 ACOX2Q99424 681 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 C17orf75Q9HAS0 396 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SLC28A3Q9HAS3 691 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CLK4Q9HAZ1 481 aaKnown RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 PLAC1Q9HBJ0 212 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GPR108Q9NPR9 543 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SIRT3Q9NTG7 399 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SETD4Q9NVD3 440 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 TAB2Q9NYJ8 693 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 OR6C3Q9NZP0 311 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CNOT8Q9UFF9 292 aaKnown RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 TTC7AQ9ULT0 858 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 FZD10Q9ULW2 581 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 FRMD4BQ9Y2L6 1034 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF711Q9Y462 761 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 IGHV4-28A0A0C4DH34 117 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 A0A1W2PPC1 479 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 TCRBV21S2A2A0A5A6 115 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 A6NL46 340 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 BTBD18B2RXH4 712 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 VCYO14598 125 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 SMAD9O15198 467 aaKnown RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 SPRY3O43610 288 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 ITM2AO43736 263 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 AVILO75366 819 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 FTCDO95954 541 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 CYP1A2P05177 515 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 APOA4P06727 396 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 ADRB2P07550 413 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 ANXA7P20073 488 aaKnown RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 SP100P23497 879 aaPredicted RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 RPL3P39023 403 aaKnown RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 CAPZA2P47755 286 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 NUDT6P53370 316 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 P2RX3P56373 397 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 FOXM1Q08050 763 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 DSC1Q08554 894 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 TRAF2Q12933 501 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 GRIK2Q13002 908 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 CDC16Q13042 620 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 MAD2L1Q13257 205 aaPredicted RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 KCNC3Q14003 757 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 CCDC96Q2M329 555 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 ZNF284Q2VY69 593 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 FSCBQ5H9T9 825 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 C9orf152Q5JTZ5 239 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 DAB2IPQ5VWQ8 1189 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 SIGIRRQ6IA17 410 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 DHRS7BQ6IAN0 325 aaPredicted RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 KRT80Q6KB66 452 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 C8orf82Q6P1X6 216 aaPredicted RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 FBXO46Q6PJ61 603 aaPredicted RBP3.07□□□□□ -1.92
HDAC6-212ENST00000461608 TAOK1Q7L7X3 1001 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 PIM3Q86V86 326 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 CCDC13Q8IYE1 715 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 SPATA6LQ8N4H0 392 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 IL17RCQ8NAC3 791 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 POGLUT1Q8NBL1 392 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 OR14L1PQ8NHC6 308 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 SPATA3Q8NHX4 192 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 ARRDC2Q8TBH0 407 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 DDB2Q92466 427 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 IGSF8Q969P0 613 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 APOL6Q9BWW8 343 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 EDEM3Q9BZQ6 932 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 RTN4RQ9BZR6 473 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 TMEM39BQ9GZU3 492 aa3.07□□□□□ -1.92
HDAC6-212ENST00000461608 NDST4Q9H3R1 872 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms