RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 MAPK15Q8TD08 544 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CCHCR1Q8TD31 782 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TADA1Q96BN2 335 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SPATA13Q96N96 652 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 DEPDC7Q96QD5 511 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LYSMD1Q96S90 227 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NAP1L3Q99457 506 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GOLGA6AQ9NYA3 693 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 UBP1Q9NZI7 540 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ZNF148Q9UQR1 794 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 R3HDM2Q9Y2K5 976 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GPSM3Q9Y4H4 160 aa13.23□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TDRD6O60522 2096 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CAPN8A6NHC0 703 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NPIPB15A6NHN6 443 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PSMD3O43242 534 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LIASO43766 372 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 OPA1O60313 960 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FGGP02679 453 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ALPIP09923 528 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 IGFALSP35858 605 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 EIF2B5Q13144 721 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 IRF4Q15306 451 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ELOCQ15369 112 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CNGA3Q16281 694 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CCNG2Q16589 344 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 WSCD2Q2TBF2 565 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 C19orf48Q6RUI8 117 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CRTC1Q6UUV9 634 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ARHGEF18Q6ZSZ5 1173 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PHACTR4Q8IZ21 702 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CBARPQ8N350 705 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SDR16C5Q8N3Y7 309 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FSTL5Q8N475 847 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 DCBLD1Q8N8Z6 715 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FAM71DQ8N9W8 422 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 IFI44Q8TCB0 444 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 HNRNPLLQ8WVV9 542 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 COQ10AQ96MF6 247 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TMEM121Q9BTD3 319 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 FSD1LQ9BXM9 530 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GBA3Q9H227 469 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MAGEE1Q9HCI5 957 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 DRG1Q9Y295 367 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GOLGA4Q13439 2230 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 AKAP13Q12802 2813 aa13.22□□□□□ -0.29
RAB11FIP3-207ENST00000461009 IGF2RP11717 2491 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LOC285095A0A1B0GVY8 99 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CPED1A4D0V7 1026 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LMO7DNF2Z398 122 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CACNB4O00305 520 aaPredicted RBP13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GCATO75600 419 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RASGRP1O95267 797 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GIMD1P0DJR0 217 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 KELP23276 732 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CXCR5P32302 372 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PTSQ03393 145 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MTM1Q13496 603 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 SNX1Q13596 522 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 INPP5AQ14642 412 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 RTP5Q14D33 572 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CDKN3Q16667 212 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PARP6Q2NL67 630 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 DEFB133Q30KQ1 61 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 P3H1Q32P28 736 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LRRC66Q68CR7 880 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LVRNQ6Q4G3 990 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 KDELC1Q6UW63 502 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 ENPP7Q6UWV6 458 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 KDM7AQ6ZMT4 941 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TSPAN33Q86UF1 283 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GKN2Q86XP6 184 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 LSMEM2Q8N112 164 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 WDR48Q8TAF3 677 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 CCDC110Q8TBZ0 833 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 C1orf54Q8WWF1 131 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NAT6Q93015 286 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 GRAMD1AQ96CP6 724 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 NUS1Q96E22 293 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 DCBLD2Q96PD2 775 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 TRIB3Q96RU7 358 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 APOOQ9BUR5 198 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 MBNL1Q9NR56 388 aaKnown RBP13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 PYCARDQ9ULZ3 195 aa13.21□□□□□ -0.29
RAB11FIP3-207ENST00000461009 C1orf232A0A0U1RR37 186 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RGSL1A5PLK6 1076 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 F5H423 210 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CLDN7O95471 211 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TNFP01375 233 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PCCBP05166 539 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PYGLP06737 847 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TSHRP16473 764 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HLA-DPA1P20036 260 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 LHCGRP22888 699 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HK3P52790 923 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 STC1P52823 247 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CLDN6P56747 220 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GNG11P61952 73 aa13.2□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GALNT3Q14435 633 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms