RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 LIMK1P53667 647 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 ATXN3P54252 364 aaPredicted RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 GDF10P55107 478 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 IFT88Q13099 833 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 RIPK1Q13546 671 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 LRRC14Q15048 493 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 PARP6Q2NL67 630 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 GLE1Q53GS7 698 aaKnown RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 GCNT7Q6ZNI0 430 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 DCP2Q8IU60 420 aaKnown RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 KLHDC8BQ8IXV7 354 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 GSPT2Q8IYD1 628 aaKnown RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 KIAA2013Q8IYS2 634 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 MREGQ8N565 214 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 IPMKQ8NFU5 416 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 NETO1Q8TDF5 533 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 CENPTQ96BT3 561 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 MRGPRX2Q96LB1 330 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 COQ10AQ96MF6 247 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 FZD3Q9NPG1 666 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 TMEM9BQ9NQ34 198 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 DRG1Q9Y295 367 aaKnown RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 ANKRD6Q9Y2G4 727 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 PLXNA2O75051 1894 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 PI4KAP42356 2102 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 EME2A4GXA9 379 aaPredicted RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 TLR4O00206 839 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 RAD51BO15315 384 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 AHCYL1O43865 530 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 DFNA5O60443 496 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 RECQL5O94762 991 aaPredicted RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 WNT1P04628 370 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 FGF1P05230 155 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 ALPIP09923 528 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 CTSKP43235 329 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 RABIFP47224 123 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 NXPH1P58417 271 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 SNX1Q13596 522 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 GALNT3Q14435 633 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 ACOX1Q15067 660 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 KIF19Q2TAC6 998 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 LRRC66Q68CR7 880 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 CRTC1Q6UUV9 634 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 C4orf22Q6V702 233 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 CBARPQ8N350 705 aaPredicted RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 OXR1Q8N573 874 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 ARFGAP2Q8N6H7 521 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 PRELID2Q8N945 189 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 CCDC89Q8N998 374 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 TP53I13Q8NBR0 393 aaPredicted RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 KLHDC7BQ96G42 594 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 MYOCQ99972 504 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 GORASP1Q9BQQ3 440 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 MAGEE1Q9HCI5 957 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 GDF3Q9NR23 364 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 UBP1Q9NZI7 540 aa11.08□□□□□ -0.64
APTX-209ENST00000460940 CORO1CQ9ULV4 474 aaPredicted RBP11.08□□□□□ -0.64
APTX-209ENST00000460940 RGSL1A5PLK6 1076 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 ERI2A8K979 691 aaKnown RBP11.07□□□□□ -0.64
APTX-209ENST00000460940 HMGB1P1B2RPK0 211 aaPredicted RBP11.07□□□□□ -0.64
APTX-209ENST00000460940 WNT9AO14904 365 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 PSMD3O43242 534 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 COQ9O75208 318 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 FESP07332 822 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 ATXN1LP0C7T5 689 aaKnown RBP11.07□□□□□ -0.64
APTX-209ENST00000460940 NR1D1P20393 614 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 SDHBP21912 280 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 IGFALSP35858 605 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 STC1P52823 247 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 BNC1Q01954 994 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 SEMG2Q02383 582 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 MTM1Q13496 603 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 IRF4Q15306 451 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 CYP1B1Q16678 543 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 WSCD2Q2TBF2 565 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 FAM182AQ5T1J6 154 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 ZNF765Q7L2R6 523 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 PTAR1Q7Z6K3 402 aaPredicted RBP11.07□□□□□ -0.64
APTX-209ENST00000460940 TSPAN33Q86UF1 283 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 NUS1Q96E22 293 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 SPDL1Q96EA4 605 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 DTD2Q96FN9 168 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 MS4A14Q96JA4 679 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 TRABDQ9H4I3 376 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 ERVMER34-1Q9H9K5 563 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 GPR27Q9NS67 375 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 HACD3Q9P035 362 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 PAK5Q9P286 719 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 COQ6Q9Y2Z9 468 aa11.07□□□□□ -0.64
APTX-209ENST00000460940 C1orf232A0A0U1RR37 186 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 A8MX80 341 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 F5H423 210 aaPredicted RBP11.06□□□□□ -0.64
APTX-209ENST00000460940 YKT6O15498 198 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 SMNDC1O75940 238 aaKnown RBP eCLIP11.06□□□□□ -0.64
APTX-209ENST00000460940 ATP6V1G2O95670 118 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 IFNB1P01574 187 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 PYGLP06737 847 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 ZNF883P0CG24 379 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 THEGLP0DJG4 465 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms