RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 OVGP1Q12889 678 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 PTK6Q13882 451 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 PDE1CQ14123 709 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-229ENST00000460826 FZD2Q14332 565 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 PPP1R7Q15435 360 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 TPSAB1Q15661 275 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 ZNF423Q2M1K9 1284 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 CERCAMQ5T4B2 595 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 HENMT1Q5T8I9 393 aaKnown RBP13.95□□□□□ -0.18
HDLBP-229ENST00000460826 ALS2CLQ60I27 953 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 RAET1GQ6H3X3 334 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 PPP1R21Q6ZMI0 780 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 MICALCLQ6ZW33 695 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 ZNF534Q76KX8 674 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 LINC00523Q86TU6 105 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 RAVER1Q8IY67 606 aaKnown RBP13.95□□□□□ -0.18
HDLBP-229ENST00000460826 MINDY1Q8N5J2 469 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
HDLBP-229ENST00000460826 CPT1BQ92523 772 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 LRRC45Q96CN5 670 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 TRIM51Q9BSJ1 452 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 LGR4Q9BXB1 951 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 FAM83DQ9H4H8 585 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 GAREM1Q9H706 876 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 CASS4Q9NQ75 786 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 KCTD5Q9NXV2 234 aa13.95□□□□□ -0.18
HDLBP-229ENST00000460826 FEZ2Q9UHY8 353 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-229ENST00000460826 PNMA8BQ9ULN7 279 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-229ENST00000460826 FNDC3AQ9Y2H6 1198 aaKnown RBP13.95□□□□□ -0.18
HDLBP-229ENST00000460826 GOLGA4Q13439 2230 aaKnown RBP13.95□□□□□ -0.18
HDLBP-229ENST00000460826 BPTFQ12830 3046 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 SPTY2D1-AS1A0A0U1RR47 76 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 RGSL1A5PLK6 1076 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 FADS2P1A8MWK0 482 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 TTI1O43156 1089 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 LDB2O43679 373 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 TSHRP16473 764 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 MAGEA6P43360 314 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 GPR1P46091 355 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 YPEL5P62699 121 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 DR1Q01658 176 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 CDH17Q12864 832 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 POU6F1Q14863 301 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 SHBQ15464 509 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 TAF1AQ15573 450 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-229ENST00000460826 ZNF542PQ5EBM4 170 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 KCTD16Q68DU8 428 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 ZNF572Q7Z3I7 529 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-229ENST00000460826 NLRP8Q86W28 1048 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 HEATR4Q86WZ0 1026 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 JAMLQ86YT9 394 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 DNAAF3Q8N9W5 541 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 OR4K2Q8NGD2 314 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 OR13C4Q8NGS5 318 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 FAM174AQ8TBP5 190 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 BRSK1Q8TDC3 778 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 SKA1Q96BD8 255 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 ZDHHC5Q9C0B5 715 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 GDF3Q9NR23 364 aa13.94□□□□□ -0.18
HDLBP-229ENST00000460826 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.94□□□□□ -0.183e-6■□□□□ 8.2
HDLBP-229ENST00000460826 NFKBIL1Q9UBC1 381 aaPredicted RBP13.94□□□□□ -0.18
HDLBP-229ENST00000460826 ZFC3H1O60293 1989 aaKnown RBP13.94□□□□□ -0.18
HDLBP-229ENST00000460826 PCNX2A6NKB5 2137 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 CCDC78A2IDD5 438 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 TMEM202A6NGA9 273 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 C4orf47A7E2U8 309 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 GAPDHSO14556 408 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 TOR1BO14657 336 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 STX7O15400 261 aaKnown RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 MAGEC1O60732 1142 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 LPOP22079 712 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 IVDP26440 423 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 TEAD1P28347 426 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 CA5AP35218 305 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 ZNF140P52738 457 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 THOP1P52888 689 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 ATXN3P54252 364 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 KIAA1024LP59773 190 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 DCDC1P59894 354 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 IL9RQ01113 521 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 EIF2B5Q13144 721 aaKnown RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 SEPT6Q14141 434 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 NFATC4Q14934 902 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 CCDC38Q502W7 563 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 STPG1Q5TH74 334 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 ADAMTSL4Q6UY14 1074 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 MACC1Q6ZN28 852 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 TRIM74Q86UV6 250 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 DCP2Q8IU60 420 aaKnown RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 RUNDC3BQ96NL0 473 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 ELF4Q99607 663 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 TEX101Q9BY14 249 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 WDR26Q9H7D7 661 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 TMEM9BQ9NQ34 198 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 ASIC3Q9UHC3 531 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 KLF15Q9UIH9 416 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 FKBPLQ9UIM3 349 aa13.93□□□□□ -0.18
HDLBP-229ENST00000460826 CNOT6Q9ULM6 557 aaKnown RBP13.93□□□□□ -0.18
HDLBP-229ENST00000460826 MRFAP1Q9Y605 127 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms